RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 IFT74Q96LB3 600 aa26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 TMEM117Q9H0C3 514 aa26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 FAM105AQ9NUU6 356 aa26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 SRPRBQ9Y5M8 271 aaKnown RBP26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 LRRIQ4A6NIV6 560 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 C5orf67F2Z3F1 127 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 ZNF623O75123 536 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 ZSCAN22P10073 491 aaPredicted RBP26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 BMPR1AP36894 532 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 MBTD1Q05BQ5 628 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 ZNF598Q86UK7 904 aaKnown RBP26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 ABI1Q8IZP0 508 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 SYT2Q8N9I0 419 aaPredicted RBP26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 CCDC51Q96ER9 411 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 USP28Q96RU2 1077 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 PLVAPQ9BX97 442 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 CCSER1Q9C0I3 900 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 KCND2Q9NZV8 630 aa26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 DAXXQ9UER7 740 aaPredicted RBP26.95■■□□□ 1.9
SDF2L1-201ENST00000248958 TBKBP1A7MCY6 615 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 H3BNC9 293 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 SLC39A14Q15043 492 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 PAN2Q504Q3 1202 aaKnown RBP26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 NAALADL2Q58DX5 795 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 CDCA2Q69YH5 1023 aaPredicted RBP26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 RINT1Q6NUQ1 792 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 KCNK18Q7Z418 384 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 CNNM3Q8NE01 707 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 PGBD4Q96DM1 585 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 PRIMPOLQ96LW4 560 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 FBXO2Q9UK22 296 aaPredicted RBP26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 MTCH2Q9Y6C9 303 aa26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 MRPL42Q9Y6G3 142 aaKnown RBP26.94■■□□□ 1.9
SDF2L1-201ENST00000248958 KIAA1671Q9BY89 1806 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 LPXNO60711 386 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 F13A1P00488 732 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 LINC00271P0C7V0 271 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 MARCKSP29966 332 aaPredicted RBP26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 HOXA11P31270 313 aaPredicted RBP26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 CTNNB1P35222 781 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 NASPP49321 788 aaPredicted RBP26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 CEBPZQ03701 1054 aaKnown RBP26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 GRIN1Q05586 938 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 BECN1Q14457 450 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 NOTUMQ6P988 496 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 PPP4R3CPQ6ZMV5 832 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 C1orf186Q6ZWK4 172 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 SPRYD3Q8NCJ5 442 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 RASSF8Q8NHQ8 419 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 DRC1Q96MC2 740 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 C11orf84Q9BUA3 381 aaPredicted RBP26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 C17orf75Q9HAS0 396 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 AAASQ9NRG9 546 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 PRMT7Q9NVM4 692 aaPredicted RBP26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 KCNG1Q9UIX4 513 aa26.93■■□□□ 1.9
SDF2L1-201ENST00000248958 CHD9Q3L8U1 2897 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 TSPAN1O60635 241 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 FGFR1P11362 822 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 GATMP50440 423 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 GPM6BQ13491 265 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 FAM187BQ17R55 369 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 RNF169Q8NCN4 708 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 DEPTORQ8TB45 409 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 GDPD5Q8WTR4 605 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 P2RX5Q93086 422 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 PLIN2Q99541 437 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 CSRNP2Q9H175 543 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 CDH23Q9H251 3354 aa26.92■■□□□ 1.9
SDF2L1-201ENST00000248958 PLA2G4BP0C869 781 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 ATF7P17544 494 aaPredicted RBP26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 GUCY2CP25092 1073 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 TXLNAP40222 546 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 STK38Q15208 465 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 PTPROQ16827 1216 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 ATL3Q6DD88 541 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 KRI1Q8N9T8 703 aaKnown RBP26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 BSNDQ8WZ55 320 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 CASD1Q96PB1 797 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 RUSC1Q9BVN2 902 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 FZD8Q9H461 694 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 CCDC39Q9UFE4 941 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 PCDHB2Q9Y5E7 798 aa26.91■■□□□ 1.9
SDF2L1-201ENST00000248958 PHLPP2Q6ZVD8 1323 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 MYH11P35749 1972 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 SSBP05455 408 aaKnown RBP eCLIP26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 EFNA5P52803 228 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 SLC12A3P55017 1021 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 MAPK6Q16659 721 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 AMHR2Q16671 573 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 CSPP1Q1MSJ5 1256 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 SPOUT1Q5T280 376 aaKnown RBP26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 MRPL10Q7Z7H8 261 aaKnown RBP26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 LRRC43Q8N309 656 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 MRPL9Q9BYD2 267 aaKnown RBP26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 LMAN2LQ9H0V9 348 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 RNF19AQ9NV58 838 aa26.9■■□□□ 1.9
SDF2L1-201ENST00000248958 HIP1RO75146 1068 aa26.89■■□□□ 1.9
SDF2L1-201ENST00000248958 PPP6R2O75170 966 aa26.89■■□□□ 1.9
SDF2L1-201ENST00000248958 YEATS4O95619 227 aa26.89■■□□□ 1.9
SDF2L1-201ENST00000248958 ARF4P18085 180 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms