RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 LRWD1Q9UFC0 647 aa23.51■■□□□ 1.35
HCFC1R1-201ENST00000248089 RPA1P27694 616 aa23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 CCT6AP40227 531 aaKnown RBP23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 FXR2P51116 673 aaKnown RBP eCLIP23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 RAB27AP51159 221 aa23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 CAPSQ13938 189 aa23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 POF1BQ8WVV4 589 aa23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 UHRF1Q96T88 793 aaPredicted RBP23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 BACH2Q9BYV9 841 aa23.5■■□□□ 1.35
HCFC1R1-201ENST00000248089 FGF18O76093 207 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 SKIP12755 728 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 XRCC6P12956 609 aaKnown RBP eCLIP23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 BMP1P13497 986 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 PBX3P40426 434 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 CAMK1Q14012 370 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 LRRC55Q6ZSA7 311 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 NECAB3Q96P71 396 aaPredicted RBP23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 RAB34Q9BZG1 259 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 GPRC5CQ9NQ84 441 aa23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 DBR1Q9UK59 544 aaKnown RBP23.49■■□□□ 1.35
HCFC1R1-201ENST00000248089 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 ARHGEF35A5YM69 484 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 INO80B-WBP1J3KQ70 363 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 GLRA2P23416 452 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 IRS1P35568 1242 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 ARL2P36404 184 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 PTENP60484 403 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 CSPP1Q1MSJ5 1256 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 SNX29Q8TEQ0 813 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 ZNF558Q96NG5 402 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 TRAIPQ9BWF2 469 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 MRPL9Q9BYD2 267 aaKnown RBP23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 IGFLR1Q9H665 355 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 CLDND1Q9NY35 253 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 INPP5FQ9Y2H2 1132 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 PCDHB2Q9Y5E7 798 aa23.48■■□□□ 1.35
HCFC1R1-201ENST00000248089 HYAL1Q12794 435 aa23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 RILPL1Q5EBL4 403 aa23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 LARP1BQ659C4 914 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 MCPH1Q8NEM0 835 aa23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 PABPC5Q96DU9 382 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 PCDHGC5Q9Y5F6 944 aa23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 NCOR1O75376 2440 aa23.47■■□□□ 1.35
HCFC1R1-201ENST00000248089 MUC3AQ02505 3323 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 LRRIQ4A6NIV6 560 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 MEIS3P2A8K0S8 358 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 H3BQ06 376 aaPredicted RBP23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 LAD1O00515 517 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 TSPAN1O60635 241 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 HOXA11P31270 313 aaPredicted RBP23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 GTF2F1P35269 517 aaKnown RBP eCLIP23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 MBTD1Q05BQ5 628 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 ECM1Q16610 540 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 PADI6Q6TGC4 694 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 KCNT2Q6UVM3 1135 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 GLB1LQ6UWU2 654 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 ADGRD2Q7Z7M1 963 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 MICAL1Q8TDZ2 1067 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 PPP2R3CQ969Q6 453 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 CPB2Q96IY4 423 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 BDP1A6H8Y1 2624 aa23.46■■□□□ 1.35
HCFC1R1-201ENST00000248089 PP2D1A8MPX8 630 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 UBE3AQ05086 875 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 PDIA5Q14554 519 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 LEXMQ3ZCV2 418 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 DTHD1Q6ZMT9 781 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 IGSF22Q8N9C0 903 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 PGBD4Q96DM1 585 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 TLR9Q9NR96 1032 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 DDX19AQ9NUU7 478 aaKnown RBP23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 KIAA1024Q9UPX6 916 aa23.45■■□□□ 1.34
HCFC1R1-201ENST00000248089 TDRD15B5MCY1 1934 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 TNFRSF10AO00220 468 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 ZNF623O75123 536 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 ZC3H11AO75152 810 aaKnown RBP eCLIP23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 MUTP22033 750 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 PPM1AP35813 382 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 PRPHP41219 470 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 NCBP1Q09161 790 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 IL17AQ16552 155 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 IFNLR1Q8IU57 520 aaPredicted RBP23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 BHMT2Q9H2M3 363 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 STK24Q9Y6E0 443 aa23.44■■□□□ 1.34
HCFC1R1-201ENST00000248089 VPS37CA5D8V6 355 aaPredicted RBP23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 NCK2O43639 380 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 RNASELQ05823 741 aaKnown RBP23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 POU5F1BQ06416 359 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 PCBP1Q15365 356 aaKnown RBP eCLIP23.43■■□□□ 1.344e-6■■■■□ 20.1
HCFC1R1-201ENST00000248089 NOMO2Q5JPE7 1267 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 UBXN11Q5T124 520 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 KRT79Q5XKE5 535 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 NOTUMQ6P988 496 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 RBM23Q86U06 439 aaKnown RBP23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 EIF2AQ9BY44 585 aaKnown RBP23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 GBP3Q9H0R5 595 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 SPG21Q9NZD8 308 aa23.43■■□□□ 1.34
HCFC1R1-201ENST00000248089 NT5C1B-RDH14C9J2C7 533 aa23.42■■□□□ 1.34
HCFC1R1-201ENST00000248089 LINC01565O15544 149 aa23.42■■□□□ 1.34
HCFC1R1-201ENST00000248089 B4GALT5O43286 388 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms