RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 THTPAQ9BU02 230 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 HESX1Q9UBX0 185 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 THNSL1Q8IYQ7 743 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 XPO6Q96QU8 1125 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 ZNF609O15014 1411 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 VCAM1P19320 739 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 ICA1LQ8NDH6 482 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 COPRSQ9NQ92 184 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 THEGQ9P2T0 379 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 CACNA1BQ00975 2339 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 NPR1P16066 1061 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 CDKL2Q92772 493 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 STAMBPL1Q96FJ0 436 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.02□□□□□ -1.136e-7■■■□□ 16.7
RIF1-201ENST00000243326 PPIP5K2O43314 1243 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 PRPF3O43395 683 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 CDC37Q16543 378 aaPredicted RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 SH3GL3Q99963 347 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 HAO1Q9UJM8 370 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 SASH3O75995 380 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 PARNO95453 639 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 HLA-DPA1P20036 260 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 E2F6O75461 281 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 ARSEP51690 589 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 CENPUQ71F23 418 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 PRCCQ92733 491 aaPredicted RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 NMD3Q96D46 503 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 TRABDQ9H4I3 376 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 SARS2Q9NP81 518 aaKnown RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 NDE1Q9NXR1 346 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 ZBTB39O15060 712 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 TRIM37O94972 964 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 MDM2Q00987 491 aaPredicted RBP8.02□□□□□ -1.13
RIF1-201ENST00000243326 CYFIP1Q7L576 1253 aa8.02□□□□□ -1.13
RIF1-201ENST00000243326 ORC1Q13415 861 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 RWDD4Q6NW29 188 aaKnown RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 IGKV5-2P06315 115 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 RAD54LQ92698 747 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 ORC6Q9Y5N6 252 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 SCINQ9Y6U3 715 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 DYTNA2CJ06 578 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 INO80B-WBP1J3KQ70 363 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 PDE8BO95263 885 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 NR3C1P04150 777 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 OATP04181 439 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 PTGISQ16647 500 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CEP170P1Q96L14 293 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 RPS6KC1Q96S38 1066 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 INO80BQ9C086 356 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 PPP1R37O75864 691 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 NME5P56597 212 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CCDC137Q6PK04 289 aaKnown RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 FAM213AQ9BRX8 229 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 EDEM3Q9BZQ6 932 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 AFF4Q9UHB7 1163 aaKnown RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 PBRM1Q86U86 1689 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 GRAP2O75791 330 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CADPS2Q86UW7 1296 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 SLFN12Q8IYM2 578 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 GNAT1P11488 350 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 STAT2P52630 851 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 DRAP1Q14919 205 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 SLC27A3Q5K4L6 730 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CCNI2Q6ZMN8 369 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 INPP5DQ92835 1189 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 MEI4A8MW99 385 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 IFNAR1P17181 557 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 ADAM22Q9P0K1 906 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 ENO3P13929 434 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 CDK8P49336 464 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 FAM83BQ5T0W9 1011 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 BBOF1Q8ND07 529 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 ADNPQ9H2P0 1102 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 HSPBP1Q9NZL4 362 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CEP72Q9P209 647 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 TLR3O15455 904 aaKnown RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 PJA2O43164 708 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 PRPSAP2O60256 369 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 MAP3K6O95382 1288 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 S100BP04271 92 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 HSPA9P38646 679 aaKnown RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 FAXCQ5TGI0 409 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 USP33Q8TEY7 942 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 STRBPQ96SI9 672 aaKnown RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 MTRQ99707 1265 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CUEDC2Q9H467 287 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 ZSCAN5CA6NGD5 496 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 MYBP10242 640 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CDAN1Q8IWY9 1227 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 MYO3BQ8WXR4 1341 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 SESN2P58004 480 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 AP1B1Q10567 949 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 RCN1Q15293 331 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 RHPN2Q8IUC4 686 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 RNF26Q9BY78 433 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 SNX12Q9UMY4 172 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 CYP26A1O43174 497 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 SKOR1P84550 965 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms