RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 ZNF653Q96CK0 615 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 CAPNS2Q96L46 248 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 MAF1Q9H063 256 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 IGSF9BQ9UPX0 1349 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 GUCY1A2P33402 732 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 LMNB2Q03252 620 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 CD302Q8IX05 232 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 GRAMD1CQ8IYS0 662 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 RYBPQ8N488 228 aaPredicted RBP8.61□□□□□ -1.03
NANOG-201ENST00000229307 TMEM35BQ8NCS4 154 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
NANOG-201ENST00000229307 TMEM143Q96AN5 459 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 NDST4Q9H3R1 872 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 RIOX1Q9H6W3 641 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 TUBE1Q9UJT0 475 aa8.61□□□□□ -1.03
NANOG-201ENST00000229307 RPA1P27694 616 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 MAN1A1P33908 653 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 NNMTP40261 264 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 SV2CQ496J9 727 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 BZW1Q7L1Q6 419 aaKnown RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 CCDC25Q86WR0 208 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 CCDC105Q8IYK2 499 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 ANKS1AQ92625 1134 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 MKL1Q969V6 931 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 UBN1Q9NPG3 1134 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 RGL1Q9NZL6 768 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 H7C4K7 107 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 PDXKO00764 312 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 IRF6O14896 467 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 PRPSAP2O60256 369 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 CLCN1P35523 988 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 PNPLA4P41247 253 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 ALDH7A1P49419 539 aaKnown RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 ALDH5A1P51649 535 aaPredicted RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 MAP2K5Q13163 448 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 ACVR2BQ13705 512 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 TMEM132DQ14C87 1099 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 ATF7IP2Q5U623 682 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 TAF2Q6P1X5 1199 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 LRRC31Q6UY01 552 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 RUFY4Q6ZNE9 571 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 SPATA2LQ8IUW3 424 aaPredicted RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 CERS5Q8N5B7 392 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 APPL2Q8NEU8 664 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 VGLL3A8MV65 326 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 SLC16A3O15427 465 aaKnown RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 RECQLP46063 649 aaPredicted RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 LONRF2Q1L5Z9 754 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 C8orf74Q6P047 294 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 SH3TC2Q8TF17 1288 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 CCT6BQ92526 530 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 TTC1Q99614 292 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 PDCD2LQ9BRP1 358 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 ZKSCAN5Q9Y2L8 839 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 MROH7Q68CQ1 1323 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 A8MXQ7 604 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 RAB27AP51159 221 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 ZNF280AP59817 542 aaPredicted RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 KCNB1Q14721 858 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 Q4G0T1 1027 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 BBOF1Q8ND07 529 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 KLRG1Q96E93 195 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 RAB17Q9H0T7 212 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 HAUS4Q9H6D7 363 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 FAM217BQ9NTX9 383 aaPredicted RBP8.6□□□□□ -1.03
NANOG-201ENST00000229307 LMCD1Q9NZU5 365 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 STAP1Q9ULZ2 295 aa8.6□□□□□ -1.03
NANOG-201ENST00000229307 C5P01031 1676 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 GOLGA8SH3BPF8 625 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 CALB1P05937 261 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 SLC12A2P55011 1212 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 TLK2Q86UE8 772 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 SMYD4Q8IYR2 804 aaPredicted RBP8.59□□□□□ -1.03
NANOG-201ENST00000229307 NSRP1Q9H0G5 558 aaKnown RBP8.59□□□□□ -1.03
NANOG-201ENST00000229307 RBSNQ9H1K0 784 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 CYP26B1Q9NR63 512 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 GJB4Q9NTQ9 266 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 TMEM63CQ9P1W3 806 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 GIPC1O14908 333 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 LRRN2O75325 713 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 ZNF189O75820 626 aaPredicted RBP8.59□□□□□ -1.03
NANOG-201ENST00000229307 HEXIM1O94992 359 aaKnown RBP8.59□□□□□ -1.03
NANOG-201ENST00000229307 GNRH1P01148 92 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 AMHP03971 560 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 RHBDL3P58872 404 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 PKP1Q13835 747 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 CASC4Q6P4E1 433 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 RFX6Q8HWS3 928 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 AFAP1L2Q8N4X5 818 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 TMEM169Q96HH4 297 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 RIC1Q4ADV7 1423 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 SERPING1P05155 500 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 IFT20Q8IY31 132 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 IFT81Q8WYA0 676 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 RPGRIP1Q96KN7 1286 aa8.59□□□□□ -1.03
NANOG-201ENST00000229307 RANBP17Q9H2T7 1088 aaKnown RBP8.59□□□□□ -1.03
NANOG-201ENST00000229307 EIF3DO15371 548 aaKnown RBP eCLIP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms