RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 SPARCL1Q14515 664 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 SBK1Q52WX2 424 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 CCDC137Q6PK04 289 aaKnown RBP17.26■□□□□ 0.35
HDAC5-201ENST00000225983 PRPF38AQ8NAV1 312 aaKnown RBP17.26■□□□□ 0.35
HDAC5-201ENST00000225983 MYMKA6NI61 221 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 KIF3CO14782 793 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 COG1Q8WTW3 980 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 RFFLQ8WZ73 363 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 PPWD1Q96BP3 646 aaKnown RBP17.26■□□□□ 0.35
HDAC5-201ENST00000225983 FBXL5Q9UKA1 691 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 MAPK13O15264 365 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 CALB1P05937 261 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 RFC1P35251 1148 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-201ENST00000225983 GPC3P51654 580 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 PPP2R2AP63151 447 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 SLC12A1Q13621 1099 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
HDAC5-201ENST00000225983 DSTYKQ6XUX3 929 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 ATP6V1E2Q96A05 226 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 KLC2Q9H0B6 622 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 SNX12Q9UMY4 172 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 F5H423 210 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-201ENST00000225983 EPM2AIP1Q7L775 607 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-201ENST00000225983 RASGRP2Q7LDG7 609 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 TRIM59Q8IWR1 403 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 SPDL1Q96EA4 605 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 C7orf25Q9BPX7 421 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
HDAC5-201ENST00000225983 TTC36A6NLP5 189 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 STXBP3O00186 592 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 PDXKO00764 312 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 CHRNA3P32297 505 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 NFX1Q12986 1120 aaKnown RBP17.25■□□□□ 0.35
HDAC5-201ENST00000225983 MUM1L1Q5H9M0 696 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 PPP1R9AQ9ULJ8 1098 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 CFLARO15519 480 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 CYP26A1O43174 497 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 KLK7P49862 253 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 LRRC14Q15048 493 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 TAF11Q15544 211 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 RWDD4Q6NW29 188 aaKnown RBP17.25■□□□□ 0.35
HDAC5-201ENST00000225983 MYCBPQ99417 103 aaPredicted RBP17.25■□□□□ 0.35
HDAC5-201ENST00000225983 COPEO14579 308 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 S100BP04271 92 aaPredicted RBP17.25■□□□□ 0.35
HDAC5-201ENST00000225983 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 CEP55Q53EZ4 464 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 RYBPQ8N488 228 aaPredicted RBP17.25■□□□□ 0.35
HDAC5-201ENST00000225983 FAM167AQ96KS9 214 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 TMPRSS15P98073 1019 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 PDE1CQ14123 709 aaPredicted RBP17.25■□□□□ 0.35
HDAC5-201ENST00000225983 EPHA7Q15375 998 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 REEP2Q9BRK0 252 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 ANGPTL3Q9Y5C1 460 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
HDAC5-201ENST00000225983 M0QYV0 167 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 KRT37O76014 449 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 COG7P83436 770 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 TADA2BQ86TJ2 420 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 PDZD8Q8NEN9 1154 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 DDX27Q96GQ7 796 aaKnown RBP17.24■□□□□ 0.35
HDAC5-201ENST00000225983 ATP6V1G3Q96LB4 118 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 SMARCAL1Q9NZC9 954 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 CSPG5O95196 566 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 ATG16L1Q676U5 607 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 SLC10A4Q96EP9 437 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 AGPAT1Q99943 283 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 ASNSD1Q9NWL6 643 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 INPP5FQ9Y2H2 1132 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 CLTCQ00610 1675 aaKnown RBP17.24■□□□□ 0.35
HDAC5-201ENST00000225983 ABCA9Q8IUA7 1624 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 GMNCA6NCL1 334 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 GPD1LQ8N335 351 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 PSPC1Q8WXF1 523 aaKnown RBP17.24■□□□□ 0.35
HDAC5-201ENST00000225983 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
HDAC5-201ENST00000225983 NTSR2O95665 410 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 TTC4O95801 387 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 RASA1P20936 1047 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 GPS1Q13098 491 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 LRRC43Q8N309 656 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 NUDCD1Q96RS6 583 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 SLC12A6Q9UHW9 1150 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 CPSF3Q9UKF6 684 aaKnown RBP17.24■□□□□ 0.35
HDAC5-201ENST00000225983 ITIH6Q6UXX5 1313 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
HDAC5-201ENST00000225983 PSMC1P62191 440 aaKnown RBP17.23■□□□□ 0.35
HDAC5-201ENST00000225983 IL1RL1Q01638 556 aa17.23■□□□□ 0.35
HDAC5-201ENST00000225983 RBAKQ9NYW8 714 aaPredicted RBP17.23■□□□□ 0.35
HDAC5-201ENST00000225983 GYPCP04921 128 aa17.23■□□□□ 0.35
HDAC5-201ENST00000225983 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
HDAC5-201ENST00000225983 ARL13BQ3SXY8 428 aa17.23■□□□□ 0.35
HDAC5-201ENST00000225983 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
HDAC5-201ENST00000225983 LINC00116Q8NCU8 138 aa17.23■□□□□ 0.35
HDAC5-201ENST00000225983 FBXL13Q8NEE6 735 aa17.23■□□□□ 0.35
HDAC5-201ENST00000225983 RNF139Q8WU17 664 aa17.23■□□□□ 0.35
HDAC5-201ENST00000225983 TARSL2A2RTX5 802 aaKnown RBP17.23■□□□□ 0.35
HDAC5-201ENST00000225983 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms