RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 NEMFO60524 1076 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 GPR37L1O60883 481 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 ZSCAN22P10073 491 aaPredicted RBP20.08■□□□□ 0.81
PFN1-201ENST00000225655 ATF7P17544 494 aaPredicted RBP20.08■□□□□ 0.81
PFN1-201ENST00000225655 NPEPPSP55786 919 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 SPIRE1Q08AE8 756 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 KCNT2Q6UVM3 1135 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 RBM23Q86U06 439 aaKnown RBP20.08■□□□□ 0.81
PFN1-201ENST00000225655 RNF169Q8NCN4 708 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 MICAL1Q8TDZ2 1067 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 RSPH1Q8WYR4 309 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 LXNQ9BS40 222 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 LRFN3Q9BTN0 628 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 TLE6Q9H808 572 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 C11orf16Q9NQ32 467 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 CLEC1BQ9P126 229 aa20.08■□□□□ 0.81
PFN1-201ENST00000225655 ARID2Q68CP9 1835 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 EYA4O95677 639 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 GLP2RO95838 553 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 PPM1AP35813 382 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 RFC5P40937 340 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 POLGP54098 1239 aaPredicted RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 ERVFC1P60507 584 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 COASYQ13057 564 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 KSR1Q8IVT5 923 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 ZNF579Q8NAF0 562 aaKnown RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 MRPS27Q92552 414 aaKnown RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 CEP170P1Q96L14 293 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 NLRP4Q96MN2 994 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 ZNF558Q96NG5 402 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 POP1Q99575 1024 aaKnown RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 CDCA3Q99618 268 aaPredicted RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 MRPL9Q9BYD2 267 aaKnown RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 DHX33Q9H6R0 707 aaKnown RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 PUF60Q9UHX1 559 aaKnown RBP20.07■□□□□ 0.8
PFN1-201ENST00000225655 ATP6V1DQ9Y5K8 247 aa20.07■□□□□ 0.8
PFN1-201ENST00000225655 BMP15O95972 392 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 SKIP12755 728 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 ALADP13716 330 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 YWHABP31946 246 aaKnown RBP20.06■□□□□ 0.8
PFN1-201ENST00000225655 MCM7P33993 719 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 PHKA2P46019 1235 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 NUCB2P80303 420 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 CALCRLQ16602 461 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 DUSP6Q16828 381 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 NCAPH2Q6IBW4 605 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 OTUD6AQ7L8S5 288 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 SMRP1Q8NCR6 262 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 HELQQ8TDG4 1101 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 ZSWIM4Q9H7M6 989 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 IFT122Q9HBG6 1241 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 RGL1Q9NZL6 768 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 RAPGEFL1Q9UHV5 662 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 PIN4Q9Y237 131 aaKnown RBP20.06■□□□□ 0.8
PFN1-201ENST00000225655 COL4A3BPQ9Y5P4 624 aa20.06■□□□□ 0.8
PFN1-201ENST00000225655 GAS2O43903 313 aaKnown RBP20.05■□□□□ 0.8
PFN1-201ENST00000225655 KRT17Q04695 432 aa20.05■□□□□ 0.8
PFN1-201ENST00000225655 RESTQ13127 1097 aa20.05■□□□□ 0.8
PFN1-201ENST00000225655 TWF2Q6IBS0 349 aaKnown RBP20.05■□□□□ 0.8
PFN1-201ENST00000225655 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
PFN1-201ENST00000225655 PSPC1Q8WXF1 523 aaKnown RBP20.05■□□□□ 0.8
PFN1-201ENST00000225655 DYDC2Q96IM9 177 aa20.05■□□□□ 0.8
PFN1-201ENST00000225655 SPG21Q9NZD8 308 aa20.05■□□□□ 0.8
PFN1-201ENST00000225655 LAD1O00515 517 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 PER2O15055 1255 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 F13A1P00488 732 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 PBX3P40426 434 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 RAB27AP51159 221 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 CYP4A11Q02928 519 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 CTTNQ14247 550 aaKnown RBP20.04■□□□□ 0.8
PFN1-201ENST00000225655 ZNF174Q15697 407 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 PRPF31Q8WWY3 499 aaKnown RBP20.04■□□□□ 0.8
PFN1-201ENST00000225655 TMEM143Q96AN5 459 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 ZNF396Q96N95 335 aaPredicted RBP20.04■□□□□ 0.8
PFN1-201ENST00000225655 TCF25Q9BQ70 676 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 NGRNQ9NPE2 291 aaKnown RBP20.04■□□□□ 0.8
PFN1-201ENST00000225655 AGPAT5Q9NUQ2 364 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 FAM105AQ9NUU6 356 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 BARX2Q9UMQ3 279 aaPredicted RBP20.04■□□□□ 0.8
PFN1-201ENST00000225655 PCDHA12Q9UN75 941 aa20.04■□□□□ 0.8
PFN1-201ENST00000225655 FAM86C2PA6NEL3 165 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 ZNF623O75123 536 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 LAMTOR4Q0VGL1 99 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 EMC2Q15006 297 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 FOXD4L5Q5VV16 416 aaPredicted RBP20.03■□□□□ 0.8
PFN1-201ENST00000225655 PLPP4Q5VZY2 271 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 SRGAP1Q7Z6B7 1085 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 SLC39A11Q8N1S5 342 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 VN1R2Q8NFZ6 395 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 TCP11Q8WWU5 503 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 FOXD4L4Q8WXT5 416 aaPredicted RBP20.03■□□□□ 0.8
PFN1-201ENST00000225655 IPO9Q96P70 1041 aaKnown RBP20.03■□□□□ 0.8
PFN1-201ENST00000225655 ENTPD7Q9NQZ7 604 aa20.03■□□□□ 0.8
PFN1-201ENST00000225655 ASAP2O43150 1006 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 DCXO43602 365 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 SLITRK3O94933 977 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 LYPLA2O95372 231 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 OR52Z1P0C646 297 aa20.02■□□□□ 0.8
PFN1-201ENST00000225655 ALDH7A1P49419 539 aaKnown RBP20.02■□□□□ 0.8
PFN1-201ENST00000225655 KCNC3Q14003 757 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms