RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 DAPK3O43293 454 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 NR3C2P08235 984 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 PLS3P13797 630 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 SLCO1A2P46721 670 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 RWDD2BP57060 319 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 KCTD2Q14681 263 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 TRIP13Q15645 432 aaPredicted RBP10.53□□□□□ -0.72
CRX-201ENST00000221996 LMBRD2Q68DH5 695 aaPredicted RBP10.53□□□□□ -0.72
CRX-201ENST00000221996 CAPN12Q6ZSI9 719 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 TRIM11Q96F44 468 aa10.53□□□□□ -0.72
CRX-201ENST00000221996 CNOT7Q9UIV1 285 aaKnown RBP10.53□□□□□ -0.72
CRX-201ENST00000221996 RCCD1A6NED2 376 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 NFIBO00712 420 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 SNHG28P0DPA3 235 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 CASP5P51878 434 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 NBPF9Q3BBW0 867 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 SAMD7Q7Z3H4 446 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 PASD1Q8IV76 773 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 RNPC3Q96LT9 517 aaKnown RBP10.52□□□□□ -0.72
CRX-201ENST00000221996 KCNMB3Q9NPA1 279 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 HOXC10Q9NYD6 342 aa10.52□□□□□ -0.72
CRX-201ENST00000221996 NXF1Q9UBU9 619 aaKnown RBP10.52□□□□□ -0.72
CRX-201ENST00000221996 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 ICAM1P05362 532 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 RFX1P22670 979 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 SLC12A3P55017 1021 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 APTXQ7Z2E3 356 aaKnown RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 KCTD17Q8N5Z5 321 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 FBXL13Q8NEE6 735 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 ZNF564Q8TBZ8 553 aaPredicted RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 ATG4CQ96DT6 458 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 NUP85Q9BW27 656 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 POLR3FQ9H1D9 316 aaPredicted RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 REXO2Q9Y3B8 237 aaKnown RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 ROBO1Q9Y6N7 1651 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 SYNGAP1Q96PV0 1343 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 COL18A1P39060 1754 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 GBP1P32455 592 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 IFNAR2P48551 515 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 YWHAEP62258 255 aaKnown RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 ZNF394Q53GI3 561 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 ZNF571Q7Z3V5 609 aaPredicted RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 TAB3Q8N5C8 712 aaPredicted RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 FAM81BQ96LP2 452 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 ACAD9Q9H845 621 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 VPS37BQ9H9H4 285 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 GPRC5CQ9NQ84 441 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 NUP188Q5SRE5 1749 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 GOLGA8SH3BPF8 625 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 H3BQF6 201 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 FDX1P10109 184 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 KRT15P19012 456 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 ANXA13P27216 316 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 KCNA1Q09470 495 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 COG2Q14746 738 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 AGBL3Q8NEM8 1001 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 KIFC3Q9BVG8 833 aa10.52□□□□□ -0.73
CRX-201ENST00000221996 DNAJC17Q9NVM6 304 aaKnown RBP10.52□□□□□ -0.73
CRX-201ENST00000221996 RAD51CO43502 376 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 SLITRK3O94933 977 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 ZRANB2O95218 330 aaKnown RBP eCLIP10.51□□□□□ -0.73
CRX-201ENST00000221996 ATP2A2P16615 1042 aaKnown RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 SNRNP35Q16560 246 aaKnown RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 TKFCQ3LXA3 575 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 CEP128Q6ZU80 1094 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 OTOP1Q7RTM1 612 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 CACNA2D3Q8IZS8 1091 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 DEFB129Q9H1M3 183 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 JPH1Q9HDC5 661 aaPredicted RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 HOMER3Q9NSC5 361 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 TRAF3IP3Q9Y228 551 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 DIS3Q9Y2L1 958 aaKnown RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 HMGB1P1B2RPK0 211 aaPredicted RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 TMEM270Q6UE05 265 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 SCARA5Q6ZMJ2 495 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 ZNF720Q7Z2F6 126 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 SH2D3CQ8N5H7 860 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 CCDC89Q8N998 374 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 USP38Q8NB14 1042 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 NLRP4Q96MN2 994 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 RUNDC3BQ96NL0 473 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 FERMT1Q9BQL6 677 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 TRIM6Q9C030 488 aaPredicted RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 MRPL47Q9HD33 250 aaKnown RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 ADAM22Q9P0K1 906 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 CHORDC1Q9UHD1 332 aaPredicted RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 RAB21Q9UL25 225 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 TTI1O43156 1089 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 PRLRP16471 622 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 CXCL9Q07325 125 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 SLFN12LQ6IEE8 588 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 DDX42Q86XP3 938 aaKnown RBP eCLIP10.51□□□□□ -0.73
CRX-201ENST00000221996 THNSL1Q8IYQ7 743 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 OLFML3Q9NRN5 406 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 BAZ2AQ9UIF9 1905 aaKnown RBP10.51□□□□□ -0.73
CRX-201ENST00000221996 DUOX1Q9NRD9 1551 aa10.51□□□□□ -0.73
CRX-201ENST00000221996 PLSCR1O15162 318 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms