RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NPTX2P47972 431 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 PAK2Q13177 524 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 DMP1Q13316 513 aaPredicted RBP26.09■■□□□ 1.77
HOMER3-201ENST00000221222 ZNF697Q5TEC3 545 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 CNKSR3Q6P9H4 555 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 PSRC1Q6PGN9 363 aaPredicted RBP26.09■■□□□ 1.77
HOMER3-201ENST00000221222 FAM228AQ86W67 206 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 DBF4BQ8NFT6 615 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 SEPT8Q92599 483 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 RNPC3Q96LT9 517 aaKnown RBP26.09■■□□□ 1.77
HOMER3-201ENST00000221222 GUCD1Q96NT3 240 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 MINDY3Q9H8M7 445 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 PARVGQ9HBI0 331 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 ERVK-5Q9HDB9 667 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 LARSQ9P2J5 1176 aaKnown RBP26.09■■□□□ 1.77
HOMER3-201ENST00000221222 PADI3Q9ULW8 664 aa26.09■■□□□ 1.77
HOMER3-201ENST00000221222 FRMD3A2A2Y4 597 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 GPR182O15218 404 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 LIG1P18858 919 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 PEX3P56589 373 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 PCBP1Q15365 356 aaKnown RBP eCLIP26.08■■□□□ 1.77
HOMER3-201ENST00000221222 TMEM240Q5SV17 173 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 CNNM3Q8NE01 707 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 C2orf40Q9H1Z8 148 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 LMBRD1Q9NUN5 540 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 ST3GAL5Q9UNP4 418 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 ADGRA3Q8IWK6 1321 aa26.08■■□□□ 1.77
HOMER3-201ENST00000221222 MYL1P05976 194 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 SFPQP23246 707 aaKnown RBP eCLIP26.07■■□□□ 1.76
HOMER3-201ENST00000221222 AFMP43652 599 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 MBTD1Q05BQ5 628 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 FAM109BQ6ICB4 259 aaPredicted RBP26.07■■□□□ 1.76
HOMER3-201ENST00000221222 ZNF365Q70YC5 407 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 ZBTB8OSQ8IWT0 167 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 DEPTORQ8TB45 409 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 TIGD1Q96MW7 591 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.07■■□□□ 1.76
HOMER3-201ENST00000221222 MICAL3Q7RTP6 2002 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 GOLGA6L22H0YM25 854 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 NR1I2O75469 434 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 CSDE1O75534 798 aaKnown RBP26.07■■□□□ 1.76
HOMER3-201ENST00000221222 FGBP02675 491 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 TCTN1Q2MV58 587 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 KANK3Q6NY19 840 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 GRAMD1CQ8IYS0 662 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 KCNN1Q92952 543 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 KMT5AQ9NQR1 393 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 ARHGAP28Q9P2N2 729 aa26.07■■□□□ 1.76
HOMER3-201ENST00000221222 CCDC169A6NNP5 214 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 RBAK-RBAKDNI3L0D1 243 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 ACTN1P12814 892 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 GAP43P17677 238 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 EFNA5P52803 228 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 SMTNP53814 917 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 MYCT1Q8N699 235 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 CCDC34Q96HJ3 373 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 KIFC3Q9BVG8 833 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 FTHL17Q9BXU8 183 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 SEL1LQ9UBV2 794 aa26.06■■□□□ 1.76
HOMER3-201ENST00000221222 INO80B-WBP1J3KQ70 363 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 GTPBP6O43824 516 aaPredicted RBP26.05■■□□□ 1.76
HOMER3-201ENST00000221222 BAIAP3O94812 1187 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 IDEP14735 1019 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 FGFR4P22455 802 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 NCKAP1LP55160 1127 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 ASIC1P78348 528 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 NFX1Q12986 1120 aaKnown RBP26.05■■□□□ 1.76
HOMER3-201ENST00000221222 CUL4BQ13620 913 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 FAM187BQ17R55 369 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 CCDC65Q8IXS2 484 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 FIZ1Q96SL8 496 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 CCDC113Q9H0I3 377 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 BLZF1Q9H2G9 400 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 TMX1Q9H3N1 280 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 FZD8Q9H461 694 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 ZHX3Q9H4I2 956 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 PANK4Q9NVE7 773 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 PHLPP2Q6ZVD8 1323 aa26.05■■□□□ 1.76
HOMER3-201ENST00000221222 ABHD14A-ACY1A0A1B0GW23 586 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 H0YCG3 227 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 TRAK2O60296 914 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 EFCAB14O75071 495 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 SCP2P22307 547 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 CASP1P29466 404 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 IKBKEQ14164 716 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 AMHR2Q16671 573 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 PPP4R3CPQ6ZMV5 832 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 CATSPER4Q7RTX7 472 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 SFR1Q86XK3 245 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 TMEM161BQ8NDZ6 487 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 HERVK_113Q902F9 699 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 TMEM134Q9H6X4 195 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 OLFML3Q9NRN5 406 aa26.04■■□□□ 1.76
HOMER3-201ENST00000221222 PVALEFA0A1B0GWK0 134 aa26.03■■□□□ 1.76
HOMER3-201ENST00000221222 SLC16A4O15374 487 aa26.03■■□□□ 1.76
HOMER3-201ENST00000221222 MAPTP10636 758 aaKnown RBP26.03■■□□□ 1.76
HOMER3-201ENST00000221222 UNC13DQ70J99 1090 aa26.03■■□□□ 1.76
HOMER3-201ENST00000221222 FAM178BQ8IXR5 827 aa26.03■■□□□ 1.76
HOMER3-201ENST00000221222 ELOA2Q8IYF1 753 aaPredicted RBP26.03■■□□□ 1.76
HOMER3-201ENST00000221222 PRIMPOLQ96LW4 560 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms