RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 WDR64B1ANS9 1081 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 NOP56O00567 594 aaKnown RBP10.5□□□□□ -0.73
CSTF1-201ENST00000217109 PPP1R37O75864 691 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 SLITRK3O94933 977 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 CD58P19256 250 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 NF2P35240 595 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 SWSAP1Q6NVH7 229 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 ZNF564Q8TBZ8 553 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-201ENST00000217109 C1orf54Q8WWF1 131 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 ROBO3Q96MS0 1386 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 LRP6O75581 1613 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 TISP43B9A030 160 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 HNRNPH3P31942 346 aaKnown RBP10.5□□□□□ -0.73
CSTF1-201ENST00000217109 RWDD2BP57060 319 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 RASA3Q14644 834 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 BRDTQ58F21 947 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-201ENST00000217109 PRAMEF18Q5VWM3 479 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 VPS37BQ9H9H4 285 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 BAIAP2L1Q9UHR4 511 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 TRAF3IP3Q9Y228 551 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 DUOX1Q9NRD9 1551 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 LAMB4A4D0S4 1761 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 RASGRF2O14827 1237 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 ATF2P15336 505 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 FECHP22830 423 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 OSTNP61366 133 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 CCDC137Q6PK04 289 aaKnown RBP10.5□□□□□ -0.73
CSTF1-201ENST00000217109 ZNF720Q7Z2F6 126 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 AENQ8WTP8 325 aaKnown RBP10.5□□□□□ -0.73
CSTF1-201ENST00000217109 GMCL1Q96IK5 515 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 ZNF668Q96K58 619 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-201ENST00000217109 DDX3XO00571 662 aaKnown RBP eCLIP10.5□□□□□ -0.732e-7■■□□□ 13.3
CSTF1-201ENST00000217109 SNHG28P0DPA3 235 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 STX2P32856 288 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 LSP1P33241 339 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 HSD17B3P37058 310 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 Q4G0T1 1027 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 C2CD6Q53TS8 623 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 DACT2Q5SW24 774 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 MOXD1Q6UVY6 613 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 PI4K2AQ9BTU6 479 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 SLITRK6Q9H5Y7 841 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 HOMER3Q9NSC5 361 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 RNF146Q9NTX7 359 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 ODF2LQ9ULJ1 636 aa10.5□□□□□ -0.73
CSTF1-201ENST00000217109 AKAP11Q9UKA4 1901 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 COL18A1P39060 1754 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 ZNF233A6NK53 670 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 NFIBO00712 420 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 PJA2O43164 708 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 OTOP1Q7RTM1 612 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 NLRP14Q86W24 1093 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 SLC7A3Q8WY07 619 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 MXRA8Q9BRK3 442 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 KCTD10Q9H3F6 313 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 AZI2Q9H6S1 392 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 TBC1D22BQ9NU19 505 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 PKD1L3Q7Z443 1732 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 USP54Q70EL1 1684 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 SPATA31A6Q5VVP1 1343 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 SYNGAP1Q96PV0 1343 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 F8VZ95 297 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 NOL4O94818 638 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 FGFR4P22455 802 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 HGSNATQ68CP4 663 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 KRT39Q6A163 491 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 CIAPIN1Q6FI81 312 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 ZBTB33Q86T24 672 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 SLC20A1Q8WUM9 679 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 FAM151AQ8WW52 585 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 CCT8L2Q96SF2 557 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 POP1Q99575 1024 aaKnown RBP10.49□□□□□ -0.73
CSTF1-201ENST00000217109 C11orf70Q9BRQ4 267 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 ISCUQ9H1K1 167 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 NUP98P52948 1817 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 SIPA1L3O60292 1781 aaPredicted RBP10.49□□□□□ -0.73
CSTF1-201ENST00000217109 MIF4GDA9UHW6 222 aaKnown RBP10.49□□□□□ -0.73
CSTF1-201ENST00000217109 POC1B-GALNT4F8VUJ3 575 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 K7ERI5 159 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 COMTP21964 271 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 ATP5DP30049 168 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 PMS2P54278 862 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 PPP2R2AP63151 447 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 BAATQ14032 418 aaPredicted RBP10.49□□□□□ -0.73
CSTF1-201ENST00000217109 CBWD6Q4V339 395 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 CBWD3Q5JTY5 395 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 CBWD5Q5RIA9 395 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 SNRNP48Q6IEG0 339 aaKnown RBP10.49□□□□□ -0.73
CSTF1-201ENST00000217109 RTKN2Q8IZC4 609 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.49□□□□□ -0.73
CSTF1-201ENST00000217109 PSMD1Q99460 953 aa10.49□□□□□ -0.73
CSTF1-201ENST00000217109 NUP188Q5SRE5 1749 aa10.48□□□□□ -0.73
CSTF1-201ENST00000217109 EIF3DO15371 548 aaKnown RBP eCLIP10.48□□□□□ -0.73
CSTF1-201ENST00000217109 DESP17661 470 aa10.48□□□□□ -0.73
CSTF1-201ENST00000217109 MDH1P40925 334 aaKnown RBP10.48□□□□□ -0.73
CSTF1-201ENST00000217109 PSMC5P62195 406 aa10.48□□□□□ -0.73
CSTF1-201ENST00000217109 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms