RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 MXRA8Q9BRK3 442 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 DNAJC17Q9NVM6 304 aaKnown RBP14.76□□□□□ -0.05
SIX4-201ENST00000216513 PCDHA5Q9Y5H7 936 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 TRIP13Q15645 432 aaPredicted RBP14.76□□□□□ -0.05
SIX4-201ENST00000216513 PTGISQ16647 500 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 CYP4A22Q5TCH4 519 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 AFAP1L2Q8N4X5 818 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 ZNF541Q9H0D2 1346 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 PIK3R2O00459 728 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 VTNP04004 478 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 ATICP31939 592 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 ARL6IP4Q66PJ3 421 aaKnown RBP14.76□□□□□ -0.05
SIX4-201ENST00000216513 INTS8Q75QN2 995 aaKnown RBP14.76□□□□□ -0.05
SIX4-201ENST00000216513 TNS4Q8IZW8 715 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 TJP2Q9UDY2 1190 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 ANGPTL3Q9Y5C1 460 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 PP2D1A8MPX8 630 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 PI4K2BG5E9Z4 385 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 STXBP3O00186 592 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 SPATA1Q5VX52 437 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 CDR2LQ86X02 465 aaPredicted RBP14.76□□□□□ -0.05
SIX4-201ENST00000216513 TMEM199Q8N511 208 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 ANKS4BQ8N8V4 417 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 TRIML1Q8N9V2 468 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 RTFDC1Q9BY42 306 aaPredicted RBP14.76□□□□□ -0.05
SIX4-201ENST00000216513 MAP3K13O43283 966 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 VIL1P09327 827 aaKnown RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 CASP14P31944 242 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 TPD52P55327 224 aaPredicted RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 NOTUMQ6P988 496 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 FAM133AQ8N9E0 248 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 TRIM11Q96F44 468 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 GSDMAQ96QA5 445 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 CAMKK2Q96RR4 588 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 SLC38A7Q9NVC3 462 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 TMEM132DQ14C87 1099 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 BZW2Q9Y6E2 419 aaKnown RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 DGAT1O75907 488 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 GTF2A1P52655 376 aaPredicted RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 LGSNQ5TDP6 509 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 OR8K1Q8NGG5 319 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 BHMTQ93088 406 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 SPZ1Q9BXG8 430 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 NPHP3-ACAD11A0A0J9YXS1 232 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 VGLL3A8MV65 326 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 ACOT2P49753 483 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 CCL23P55773 120 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 GPD1LQ8N335 351 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 TACO1Q9BSH4 297 aaKnown RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 SMYD2Q9NRG4 433 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 KCNH7Q9NS40 1196 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 STRNO43815 780 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 SLFN14P0C7P3 912 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 COPB1P53618 953 aaKnown RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 LY6KQ17RY6 165 aa14.75□□□□□ -0.05
SIX4-201ENST00000216513 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 DDX41Q9UJV9 622 aaKnown RBP14.75□□□□□ -0.05
SIX4-201ENST00000216513 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 HOXA2O43364 376 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 KRT15P19012 456 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 PSMA2P25787 234 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 PPP4R1Q8TF05 950 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 HASPINQ8TF76 798 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 IQCDQ96DY2 449 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 PAGE5Q96GU1 130 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 TRIM56Q9BRZ2 755 aaKnown RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 SETD4Q9NVD3 440 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 PXDNQ92626 1479 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 KPNA6O60684 536 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 DSG3P32926 999 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 ACTR2P61160 394 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 DUOXA2Q1HG44 320 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 CEP85LQ5SZL2 805 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 SMAP1Q8IYB5 467 aaPredicted RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 C7orf61Q8IZ16 206 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 SAMSN1Q9NSI8 373 aaKnown RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 FAM8A1Q9UBU6 413 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 CEMIPQ8WUJ3 1361 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 NECAB2Q7Z6G3 386 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 CLMNQ96JQ2 1002 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 PRR23AA6NEV1 266 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 EBAG9O00559 213 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 SKIP12755 728 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 ELNP15502 786 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 SP100P23497 879 aaPredicted RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 PPP4CP60510 307 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 RBL2Q08999 1139 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 FSCN1Q16658 493 aaKnown RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 DARS2Q6PI48 645 aaKnown RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 ARHGEF18Q6ZSZ5 1173 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 ACRBPQ8NEB7 543 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
SIX4-201ENST00000216513 BCL2L12Q9HB09 334 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 PGK1P00558 417 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 NR3C1P04150 777 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 GSTA1P08263 222 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 GSTA2P09210 222 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 TADA2BQ86TJ2 420 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 ASIC4Q96FT7 647 aa14.74□□□□□ -0.05
SIX4-201ENST00000216513 WNK4Q96J92 1243 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms