RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Pik3caP42337 1068 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Muc3aQ3U5A2 218 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 ItgaeQ60677 1167 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Atp6v0d2Q80SY3 350 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Tmem117Q8BH18 514 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Snip1Q8BIZ6 383 aaKnown RBP11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Fbxo44Q8BK26 255 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Klhl11Q8CE33 709 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Ivns1abpQ920Q8 642 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Trp53inp1Q9QXE4 239 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Samd1D3YXK1 519 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Actn3O88990 900 aaKnown RBP11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gna15P30678 374 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Map2k1P31938 393 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Vgll3P85442 326 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Il6stQ00560 917 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 SelpQ01102 768 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gm1587Q3UT80 123 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gm5935Q497S0 212 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Cyp3a11Q64459 504 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Q66JV7 365 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Srd5a1Q68FF9 255 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 TxlnaQ6PAM1 554 aaKnown RBP11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Depdc1bQ8BH88 529 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Zswim4Q8C7B8 1101 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Matr3Q8K310 846 aaKnown RBP11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Fgd4Q91ZT5 766 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Ino80bQ99PT3 375 aaKnown RBP11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 1700129C05RikQ9CQ77 218 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 1700016D06RikQ9DAA5 166 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 H2afxP27661 143 aaKnown RBP11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Polr2fP61219 127 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Phactr1Q2M3X8 580 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Znf532Q6NXK2 1036 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Psmd5Q8BJY1 504 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 AsphQ8BSY0 741 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Ppme1Q8BVQ5 386 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Tspan8Q8R3G9 235 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Dnajc17Q91WT4 303 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Srgap2Q91Z67 1071 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 PrameQ9D4Z5 464 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 H2-OaQ9QWV1 250 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Limd1Q9QXD8 668 aa11.74□□□□□ -0.53
Lig3-210ENSMUST00000173347 Fndc3c1Q6DFV6 1356 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Thsd7bQ6P4U0 1607 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Mmrn2A6H6E2 943 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 EpoP07321 192 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 H2afzP0C0S6 128 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Cxcl9P18340 126 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Tnnt2P50752 301 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 H2afvQ3THW5 128 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Lrrc14bQ3UJB3 510 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Pacsin1Q61644 441 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Kctd6Q8BNL5 237 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Lmo3Q8BZL8 145 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 N4bp3Q8C7U1 537 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 AdarQ99MU3 1178 aaKnown RBP11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Ergic2Q9CR89 377 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Rnf103Q9R1W3 683 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Trip11E9Q512 1976 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Calcoco2A2A6M5 331 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Osbpl7A2A716 963 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Serpinb3aG3X9V8 387 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Clk2O35491 499 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Tcp1P11983 556 aaKnown RBP11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gfpt1P47856 697 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Capza3P70190 299 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Col9a2Q07643 688 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Emc10Q3TAS6 258 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 NfrkbQ6PIJ4 1296 aaKnown RBP11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 GlmnQ8BZM1 596 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Prl7b1Q8CGZ9 251 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Ctu1Q99J10 420 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Rnf34Q99KR6 376 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gyg1Q9R062 333 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Trpm7Q923J1 1863 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gm28919A0A087WP35 240 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Fmr1P35922 614 aaKnown RBP11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Mfsd14aP70187 490 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 GclcP97494 637 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Asap3Q5U464 904 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Trim65Q8BFW4 522 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Slc45a1Q8BIV7 751 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Pnpla2Q8BJ56 486 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Arfgap2Q99K28 520 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Znf687Q9D2D7 1237 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Spata17Q9D552 379 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 ThegQ9JMB1 375 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 JmyQ9QXM1 983 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Arih1Q9Z1K5 555 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Btbd19S4R1I0 287 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Col11a1Q61245 1804 aa11.73□□□□□ -0.53
Lig3-210ENSMUST00000173347 Sclt1G5E861 688 aa11.72□□□□□ -0.53
Lig3-210ENSMUST00000173347 Enc1O35709 589 aa11.72□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gucy1b3O54865 620 aa11.72□□□□□ -0.53
Lig3-210ENSMUST00000173347 Prom1O54990 867 aa11.72□□□□□ -0.53
Lig3-210ENSMUST00000173347 MafP54843 370 aa11.72□□□□□ -0.53
Lig3-210ENSMUST00000173347 FdxrQ61578 494 aa11.72□□□□□ -0.53
Lig3-210ENSMUST00000173347 Gba2Q69ZF3 918 aa11.72□□□□□ -0.53
Lig3-210ENSMUST00000173347 Acot5Q6Q2Z6 421 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms