RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 OtoaQ8K561 1137 aa9.46□□□□□ -0.89
Col28a1-201ENSMUST00000115537 StambpQ9CQ26 424 aa9.46□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Znf654Q9DAU9 571 aa9.46□□□□□ -0.89
Col28a1-201ENSMUST00000115537 Fam122aQ9DB52 284 aa9.46□□□□□ -0.89
Col28a1-201ENSMUST00000115537 PfasQ5SUR0 1337 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 PgfP49764 158 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fam81aQ3UXZ6 364 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Sh3d21Q7TSG5 549 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Galnt17Q7TT15 598 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Sgsm3Q8VCZ6 750 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ndufb9Q9CQJ8 179 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fgfr1op2Q9CRA9 253 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Spata1Q9D5R4 444 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 IscuQ9D7P6 168 aa9.46□□□□□ -0.9
Col28a1-201ENSMUST00000115537 TxnP10639 105 aaKnown RBP9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Xrcc5P27641 732 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Hoxc10P31257 342 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 PctpP53808 214 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Prom2Q3UUY6 835 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Syce2Q505B8 171 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 HnrnpdQ60668 355 aaKnown RBP9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 AdalQ80SY6 360 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ppfia2Q8BSS9 1257 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Dclre1bQ8C7W7 541 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Il31raQ8K5B1 716 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Slc12a6Q924N4 1150 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nxnl2Q9D531 156 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Serpinb12Q9D7P9 423 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pacsin2Q9WVE8 486 aaKnown RBP9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tjp2Q9Z0U1 1167 aaKnown RBP9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pck1Q9Z2V4 622 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Lonrf2B2RT44 518 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Lgr6Q3UVD5 967 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Foxn3Q499D0 457 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gas7Q60780 421 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Adam6bQ6IMH7 756 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cypt2Q6P924 180 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Sap130Q8BIH0 1057 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Hook3Q8BUK6 718 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gprasp2Q8BUY8 826 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 NcaldQ91X97 193 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Elp3Q9CZX0 547 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Erp44Q9D1Q6 406 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Borcs6Q9D6W8 360 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Scgb2b12S4R2L0 112 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ccdc175E9PVB3 822 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm4307E9PZY4 289 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm4312K9J7E2 289 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Art2bO35975 289 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Oprl1P35377 367 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 CtshP49935 333 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gsdmc4Q3TR54 480 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cog7Q3UM29 770 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Spata5Q3UMC0 893 aaKnown RBP9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Scnn1aQ61180 699 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tspyl5Q69ZB3 406 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cabs1Q8C633 391 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Alx1Q8C8B0 326 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Lrrc41Q8K1C9 807 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Atp2a1Q8R429 994 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ces1Q8VCC2 565 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tom1l1Q923U0 474 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gdap2Q9DBL2 498 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rcan1Q9JHG6 198 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Slc13a1Q9JHI4 594 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pard6bQ9JK83 371 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Plcg1Q62077 1302 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Serpina16D3Z660 418 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rfpl4bJ3QPR6 266 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Adam7O35227 789 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Calb2Q08331 271 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Vps41Q5KU39 853 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nell2Q61220 819 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Prr18Q6PAN7 307 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 SugctQ7TNE1 436 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nop9Q8BMC4 636 aaKnown RBP9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rasgrp4Q8BTM9 673 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Dpp9Q8BVG4 862 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Apol7cQ8C6E1 369 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Trip10Q8CJ53 603 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Zbtb44Q8R0A2 453 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ubxn6Q99PL6 442 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gpihbp1Q9D1N2 228 aa9.45□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nfx1B1AY10 1114 aaKnown RBP9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ppp1r9aH3BJD6 1292 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Zfp408H7BX78 710 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nr5a1P33242 462 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rab21P35282 222 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Vmn1r209Q5NC97 312 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tmem120aQ8C1E7 343 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pcdhb3Q91XZ7 784 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ino80bQ99PT3 375 aaKnown RBP9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 PycardQ9EPB4 193 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Adrm1Q9JKV1 407 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tcp11x2A2AEI7 503 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Arhgef10lA2AWP8 1280 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Herc3A6H6S0 1050 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Atoh1P48985 351 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 FerP70451 823 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pyroxd1Q3TMV7 498 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms