RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Rasal2E9PW37 1286 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Mmp15O54732 657 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Krt8P11679 490 aaKnown RBP12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Dab2ipQ3UHC7 1189 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ppp1r1bQ60829 194 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Scnn1aQ61180 699 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tmem120aQ8C1E7 343 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 F11Q91Y47 624 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ccdc91Q9D8L5 442 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tlr9Q9EQU3 1032 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Znf394Q9Z1D9 521 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Serpinb6cW4VSP4 379 aa12.47□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Usp31E9Q6Y8 1344 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ccdc152E9PX14 254 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Casp8O89110 480 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pick1Q62083 416 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Kcnt1Q6ZPR4 1224 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 SpopQ6ZWS8 374 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Stambpl1Q76N33 436 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 P2ry10Q8BFU7 328 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 PhykplQ8R1K4 467 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Nmrk1Q91W63 195 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Tom1l1Q923U0 474 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 HgsQ99LI8 775 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ergic2Q9CR89 377 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 IvdQ9JHI5 424 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 OatP29758 439 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Pik3caP42337 1068 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Creb1Q01147 341 aaKnown RBP12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 YdjcQ14BV6 310 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Znf583Q3V080 568 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Scaf8Q6DID3 1268 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Ddx31Q6NZQ2 687 aaKnown RBP12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Enoph1Q8BGB7 257 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Phf20Q8BLG0 1010 aaKnown RBP12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Plekhg6Q8R0J1 787 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 Cplx3Q8R1B5 158 aa12.46□□□□□ -0.41
Col9a1-202ENSMUST00000088349 TicrrQ8BQ33 1889 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pitpnm2Q6ZPQ6 1335 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tsc2Q61037 1814 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gm4297D3YWB7 211 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Serpinb6eI7HJI3 429 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nedd1P33215 660 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tfcp2l1Q3UNW5 479 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pla2g4eQ50L42 875 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Best3Q6H1V1 669 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ppfia2Q8BSS9 1257 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 PpatQ8CIH9 517 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cyp2d26Q8CIM7 500 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Abcf3Q8K268 709 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cmtm5Q9D6G9 156 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Eya4Q9Z191 616 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Lactbl1S4R213 581 aa12.46□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cep85lA0A1W2P884 806 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 DgkkE9Q7N4 1118 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Vmn2r77L7N2B7 854 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Siah1bQ06985 282 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gm10488Q4KL05 212 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Miga1Q4QQM5 600 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Stk38lQ7TSE6 464 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Trim65Q8BFW4 522 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tor4aQ8BH02 426 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ago4Q8CJF8 861 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Znf830Q8R1N0 363 aaKnown RBP12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Thoc1Q8R3N6 657 aaKnown RBP12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tti1Q91V83 1085 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 IqcdQ9D3V1 458 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rfwd2Q9R1A8 733 aaKnown RBP12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Snx1Q9WV80 522 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Col5a2Q3U962 1497 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Zbtb17Q60821 794 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Kif5bQ61768 963 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ttyh3Q6P5F7 524 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ano5Q75UR0 904 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Sestd1Q80UK0 696 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Q8BGD0 127 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 MslnlQ8C160 685 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Fam118bQ8C569 351 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Riox2Q8CD15 465 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Depdc1aQ8CIG0 804 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ints9Q8K114 658 aaKnown RBP12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Unc5bQ8K1S3 945 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ccdc65Q8VHI7 493 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Slc14a1Q8VHL0 384 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Armc9Q9D2I5 817 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Grtp1Q9D3N8 359 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Llcfc1Q9D9P8 108 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 C4bP01029 1738 aa12.45□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Got1P05201 413 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Eno1P17182 434 aaKnown RBP12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Znf354cQ571J5 560 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Lrig3Q6P1C6 1117 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tmem39bQ810L4 492 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 NrcamQ810U4 1256 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Grhl1Q921D9 618 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gtf2ird1Q9JI57 1104 aaKnown RBP12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nfs1Q9Z1J3 459 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gm28360A0A087WR25 190 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tbc1d16A2ABG4 766 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cfap221A9Q751 836 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms