RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pm20d1Q8C165 503 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trpv6Q91WD2 767 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 ArhgdiaQ99PT1 204 aaKnown RBP10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Popdc2Q9ES82 367 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Anapc7Q9WVM3 565 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm45261A0A1B0GSP6 197 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmcc1Q69ZZ6 649 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sap130Q8BIH0 1057 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Spice1Q8C804 860 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cdk9Q99J95 372 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mis18aQ9CZJ6 204 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Serpinb3bQ9D1Q5 387 aa10.77□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pitpnm2Q6ZPQ6 1335 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tlk2O55047 718 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ifnb1P01575 182 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 S100a9P31725 113 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 E2f8Q58FA4 860 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Krt40Q6IFX3 439 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Dcaf5Q80T85 946 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Catsper3Q80W99 395 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Efl1Q8C0D5 1127 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Sox30Q8CGW4 782 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ube2q2Q8K2Z8 378 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Dync1li1Q8R1Q8 523 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 PccaQ91ZA3 724 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Dnajc14Q921R4 703 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Atp11cQ9QZW0 1129 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3415J3QMS8 315 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nt5c2Q3V1L4 560 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Trim38Q5SZ99 471 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Palm2Q8BR92 376 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3404Q9D506 307 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nsmce1Q9D720 266 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ccdc103Q9D9P2 237 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Scgb2b7D3YYY1 112 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 E2f6O54917 272 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Il2P04351 169 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Serpina1aP07758 413 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Serpina1cQ00896 412 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Serpina1dQ00897 413 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fam8a1Q3URQ4 399 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 PighQ5M9N4 188 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Itih3Q61704 889 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Xlr3bQ6P205 226 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Sh3tc2Q80VA5 1289 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Q8K2W9 541 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Haus8Q99L00 373 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mms19Q9D071 1031 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Adarb2Q9JI20 745 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Slc26a4Q9R155 780 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 PtpruB1AUH1 1446 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 RereQ80TZ9 1558 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Flt4P35917 1363 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 HelqQ2VPA6 1069 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cep295nlQ497N6 533 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Meis1Q60954 390 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tfe3Q64092 572 aaKnown RBP10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 C2cd2lQ80X80 706 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Q8BGD0 127 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Hars2Q99KK9 505 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Abtb1Q99LJ2 478 aa10.77□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Kcng1A2BDX4 514 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tcp10bE9PYJ0 438 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Nol4P60954 483 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm5592Q3V0A6 857 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Als2clQ60I26 952 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fam192aQ91WE2 254 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Prpsap1Q9D0M1 356 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ascc1Q9D8Z1 356 aaKnown RBP10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Gm3182K7N6T8 263 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Ccnd1P25322 295 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tfdp1Q08639 410 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Lrch2Q3UMG5 773 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Prkaa1Q5EG47 559 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Klhl11Q8CE33 709 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 DpydQ8CHR6 1025 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Shcbp1Q9Z179 668 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 1700024B05RikE9Q6D7 167 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Fgd3O88842 733 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 SftpbP50405 377 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Setd4P58467 439 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Lzts1P60853 599 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Patl1Q3TC46 770 aaKnown RBP10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Adamts18Q4VC17 1219 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Mindy1Q76LS9 468 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Best2Q8BGM5 508 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Cdc26Q99JP4 85 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 FignQ9ERZ6 759 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Neurl4Q5NCX5 1563 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Krt35Q497I4 455 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 PolnQ7TQ07 864 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Pde10aQ8CA95 790 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tdrd7Q8K1H1 1086 aaKnown RBP10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Atp10bB1AWN4 1474 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Zfand4D3Z3C6 739 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Dab1P97318 588 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tmem247Q497K7 211 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tmem179Q8BHH9 233 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Tarsl2Q8BLY2 790 aa10.76□□□□□ -0.69
Ubr1-201ENSMUST00000028728 Clptm1Q8VBZ3 664 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms