RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Fam198bQ3UPI1 517 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Insm1Q63ZV0 521 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 IgflQ6B9Z0 140 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ssxb10Q6XAR7 170 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Tas2r134Q7TQB0 298 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Sap130Q8BIH0 1057 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Fyb2A2A995 729 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Exoc4O35382 975 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Slc3a2P10852 526 aaKnown RBP20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Calb1P12658 261 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ercc5P35689 1170 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Etv6P97360 485 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Sfi1Q3UZY0 1216 aaKnown RBP20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 EsrrbQ61539 433 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ints8Q80V86 995 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Efcab14Q8BGQ6 484 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 PolrmtQ8BKF1 1207 aaKnown RBP20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gcfc2Q8BKT3 769 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ppfia2Q8BSS9 1257 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Als2cr12Q8BVM7 383 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Snx24Q9CRB0 169 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Thumpd2Q9CZB3 528 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 MycbpQ9EQS3 103 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Lamb2Q61292 1799 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gxylt1Q3UHH8 404 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 D630036H23RikQ3UQD6 204 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Tmem132dQ76HP3 1097 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ccdc25Q78PG9 208 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Tmx4Q8C0L0 335 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gramd4Q8CB44 633 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Grhl1Q921D9 618 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 PdhbQ9D051 359 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Serpina9Q9D7D2 418 aa20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Drg2Q9QXB9 364 aaKnown RBP20.22■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Shox2P70390 331 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Vars2Q3U2A8 1060 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Brd9Q3UQU0 596 aaKnown RBP20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ttf2Q5NC05 1138 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Trim37Q6PCX9 961 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Raver2Q7TPD6 673 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Fbxo10Q7TQF2 950 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Iws1Q8C1D8 766 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Lin9Q8C735 542 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 OtoaQ8K561 1137 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Grk1Q9WVL4 564 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 DohhA0A1Y7VJ29 135 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Atp2c2A7L9Z8 944 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cdk14O35495 469 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Slc16a2O70324 545 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Xrcc6P23475 608 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Pik3r1P26450 724 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 RxrbP28704 520 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Jdp2P97875 163 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cyp11b1Q3TG86 501 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 MaeaQ4VC33 396 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 P4ha1Q60715 534 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Sh3d21Q7TSG5 549 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Tarsl2Q8BLY2 790 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 HhatQ8BMT9 499 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Kiaa0391Q8JZY4 584 aaKnown RBP20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Asb11Q9CQ31 323 aa20.21■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 XdhQ00519 1335 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rasal2E9PW37 1286 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Heatr4E9Q357 955 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 AfpP02772 605 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tph1P17532 447 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Pon1P52430 355 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rit2P70425 217 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ctc1Q5SUQ9 1212 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 4930550L24RikQ99PA7 320 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rtn3Q9ES97 964 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rnf103Q9R1W3 683 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Pex5O09012 639 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Parp2O88554 559 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Hoxc13P50207 328 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ccdc33Q3ULW6 985 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Vav2Q60992 868 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ctnna2Q61301 953 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tfe3Q64092 572 aaKnown RBP20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ano5Q75UR0 904 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Nop53Q8BK35 484 aaKnown RBP20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Kat5Q8CHK4 513 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Dppa3Q8QZY3 150 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Slc12a8Q8VI23 705 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Dph6Q9CQ28 267 aa20.2■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Mia3Q8BI84 1930 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Csf1rP09581 977 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Pik3caP42337 1068 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Kctd19Q562E2 927 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ccdc92bQ5SUE3 299 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ccdc186Q8C9S4 917 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Cd2bp2Q9CWK3 342 aaKnown RBP20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Snx10Q9CWT3 201 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rnf4Q9QZS2 194 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Lrrc74aA0A1Y7VMD6 494 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Proca1B0QZF7 307 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Dnajb6O54946 365 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Retreg2Q6NS82 541 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rusc1Q8BG26 893 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Fbxo38Q8BMI0 1194 aa20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms