RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W CBP6P07253 162 aaPredicted RBP5.94□□□□□ -1.46
LSC1YOR142W CAR2P07991 424 aaKnown RBP5.94□□□□□ -1.46
LSC1YOR142W PDX1P16451 410 aa5.94□□□□□ -1.46
LSC1YOR142W AIM17P23180 465 aaKnown RBP5.94□□□□□ -1.46
LSC1YOR142W APE2P32454 952 aaKnown RBP5.94□□□□□ -1.46
LSC1YOR142W AST1P35183 429 aa5.94□□□□□ -1.46
LSC1YOR142W COS9P36034 407 aa5.94□□□□□ -1.46
LSC1YOR142W YKL077WP36081 392 aa5.94□□□□□ -1.46
LSC1YOR142W YMR262WP38430 313 aa5.94□□□□□ -1.46
LSC1YOR142W MGE1P38523 228 aa5.94□□□□□ -1.46
LSC1YOR142W SPO73P40031 143 aa5.94□□□□□ -1.46
LSC1YOR142W COG3P40094 801 aa5.94□□□□□ -1.46
LSC1YOR142W RFC4P40339 323 aaKnown RBP5.94□□□□□ -1.46
LSC1YOR142W XBP1P40489 647 aa5.94□□□□□ -1.46
LSC1YOR142W QRI7P43122 407 aa5.94□□□□□ -1.46
LSC1YOR142W IRC7P43623 340 aa5.94□□□□□ -1.46
LSC1YOR142W FMP33P46998 180 aa5.94□□□□□ -1.46
LSC1YOR142W NIT2P47016 307 aa5.94□□□□□ -1.46
LSC1YOR142W DAM1P53267 343 aa5.94□□□□□ -1.46
LSC1YOR142W SOK2P53438 785 aaPredicted RBP5.94□□□□□ -1.46
LSC1YOR142W SNF12P53628 566 aa5.94□□□□□ -1.46
LSC1YOR142W YPR127WQ06494 345 aa5.94□□□□□ -1.46
LSC1YOR142W GRE1Q08969 168 aa5.94□□□□□ -1.46
LSC1YOR142W YAL064W-BO13512 126 aa5.93□□□□□ -1.46
LSC1YOR142W UTR1P21373 530 aa5.93□□□□□ -1.46
LSC1YOR142W SNC1P31109 117 aa5.93□□□□□ -1.46
LSC1YOR142W MRPL6P32904 214 aa5.93□□□□□ -1.46
LSC1YOR142W JEN1P36035 616 aa5.93□□□□□ -1.46
LSC1YOR142W MRPL16P38064 232 aa5.93□□□□□ -1.46
LSC1YOR142W SLM4P38247 162 aa5.93□□□□□ -1.46
LSC1YOR142W MTC6P38849 526 aa5.93□□□□□ -1.46
LSC1YOR142W TOK1P40310 691 aa5.93□□□□□ -1.46
LSC1YOR142W YIL166CP40445 542 aa5.93□□□□□ -1.46
LSC1YOR142W NAS2P40555 220 aa5.93□□□□□ -1.46
LSC1YOR142W YGR168CP53293 376 aa5.93□□□□□ -1.46
LSC1YOR142W MPP6P53725 186 aaPredicted RBP5.93□□□□□ -1.46
LSC1YOR142W ALG12P53730 551 aa5.93□□□□□ -1.46
LSC1YOR142W NDL1Q06568 189 aa5.93□□□□□ -1.46
LSC1YOR142W IRC19Q07843 230 aa5.93□□□□□ -1.46
LSC1YOR142W COQ10Q08058 207 aa5.93□□□□□ -1.46
LSC1YOR142W NTG2Q08214 380 aa5.93□□□□□ -1.46
LSC1YOR142W YDL176WQ12027 708 aa5.93□□□□□ -1.46
LSC1YOR142W VIK1Q12045 647 aa5.93□□□□□ -1.46
LSC1YOR142W SPC3Q12133 184 aa5.93□□□□□ -1.46
LSC1YOR142W HMG1P12683 1054 aa5.92□□□□□ -1.46
LSC1YOR142W RRP7P25368 297 aaPredicted RBP5.92□□□□□ -1.46
LSC1YOR142W PRE2P30656 287 aaKnown RBP5.92□□□□□ -1.46
LSC1YOR142W ASF2P32448 525 aaPredicted RBP5.92□□□□□ -1.46
LSC1YOR142W PEP12P32854 288 aa5.92□□□□□ -1.46
LSC1YOR142W TRS65P32893 560 aa5.92□□□□□ -1.46
LSC1YOR142W SLC1P33333 303 aa5.92□□□□□ -1.46
LSC1YOR142W RTC2P38279 296 aa5.92□□□□□ -1.46
LSC1YOR142W CTF8P38877 133 aa5.92□□□□□ -1.46
LSC1YOR142W YAR028WP39548 234 aa5.92□□□□□ -1.46
LSC1YOR142W KRE29P40026 464 aa5.92□□□□□ -1.46
LSC1YOR142W FAR7P43592 221 aa5.92□□□□□ -1.46
LSC1YOR142W MSY1P48527 492 aa5.92□□□□□ -1.46
LSC1YOR142W ASI1P54074 624 aa5.92□□□□□ -1.46
LSC1YOR142W YMR265CQ03508 461 aaKnown RBP5.92□□□□□ -1.46
LSC1YOR142W SCS7Q03529 384 aa5.92□□□□□ -1.46
LSC1YOR142W VBA4Q04602 768 aaKnown RBP5.92□□□□□ -1.46
LSC1YOR142W YMR226CQ05016 267 aaKnown RBP5.92□□□□□ -1.46
LSC1YOR142W COQ11Q05892 277 aa5.92□□□□□ -1.46
LSC1YOR142W SNT309Q06091 175 aaPredicted RBP5.92□□□□□ -1.46
LSC1YOR142W HRT1Q08273 121 aa5.92□□□□□ -1.46
LSC1YOR142W YPL191CQ08930 360 aa5.92□□□□□ -1.46
LSC1YOR142W FOL3Q12676 427 aaPredicted RBP5.92□□□□□ -1.46
LSC1YOR142W FBA1P14540 359 aaKnown RBP5.91□□□□□ -1.46
LSC1YOR142W NUP1P20676 1076 aa5.91□□□□□ -1.46
LSC1YOR142W POL4P25615 582 aa5.91□□□□□ -1.46
LSC1YOR142W PRP19P32523 503 aaKnown RBP5.91□□□□□ -1.46
LSC1YOR142W GPX1P36014 167 aa5.91□□□□□ -1.46
LSC1YOR142W YKL071WP36086 256 aa5.91□□□□□ -1.46
LSC1YOR142W AIM3P38266 947 aaKnown RBP5.91□□□□□ -1.46
LSC1YOR142W MDJ2P42834 146 aa5.91□□□□□ -1.46
LSC1YOR142W BRR6P53062 197 aa5.91□□□□□ -1.46
LSC1YOR142W COS1P53822 381 aa5.91□□□□□ -1.46
LSC1YOR142W DML1Q03652 475 aa5.91□□□□□ -1.46
LSC1YOR142W MRPL1Q04599 285 aa5.91□□□□□ -1.46
LSC1YOR142W CRR1Q05790 422 aa5.91□□□□□ -1.46
LSC1YOR142W UTP21Q06078 939 aaPredicted RBP5.91□□□□□ -1.46
LSC1YOR142W YPR147CQ06522 304 aaKnown RBP5.91□□□□□ -1.46
LSC1YOR142W LOT6Q07923 191 aa5.91□□□□□ -1.46
LSC1YOR142W RCN2Q12044 265 aa5.91□□□□□ -1.46
LSC1YOR142W SET6Q12529 373 aa5.91□□□□□ -1.46
LSC1YOR142W RHO1P06780 209 aaKnown RBP5.9□□□□□ -1.46
LSC1YOR142W PEP4P07267 405 aaKnown RBP5.9□□□□□ -1.46
LSC1YOR142W MCM1P11746 286 aa5.9□□□□□ -1.46
LSC1YOR142W HAP4P14064 554 aa5.9□□□□□ -1.46
LSC1YOR142W SNF6P18888 332 aa5.9□□□□□ -1.46
LSC1YOR142W RPI1P23250 407 aaKnown RBP5.9□□□□□ -1.46
LSC1YOR142W ATG15P25641 520 aa5.9□□□□□ -1.46
LSC1YOR142W SBA1P28707 216 aaKnown RBP5.9□□□□□ -1.46
LSC1YOR142W HIS7P33734 552 aaKnown RBP5.9□□□□□ -1.46
LSC1YOR142W SIC1P38634 284 aa5.9□□□□□ -1.46
LSC1YOR142W FET3P38993 636 aa5.9□□□□□ -1.46
LSC1YOR142W NAB3P38996 802 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
LSC1YOR142W SNL1P40548 159 aa5.9□□□□□ -1.46
LSC1YOR142W STB1P42845 420 aa5.9□□□□□ -1.46
LSC1YOR142W CHA4P43634 648 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms