RNA–Protein interactions for RNA: YNL251C

NRD1, Transcript of RNA-binding subunit of Nrd1 complex, yeast

Gene NRD1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NRD1	YNL251C	MTC2	P34246	357 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	SSS1	P35179	80 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	TCM62	P38228	572 aa	Known RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	BMT2	P38278	337 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	MTC4	P38335	694 aa	Known RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	BSD2	P38356	321 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	RAD55	P38953	406 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	IME4	P41833	600 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	RPS7B	P48164	190 aa	Known RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	PBP1	P53297	722 aa	Known RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	RSM27	P53305	110 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YDL176W	Q12027	708 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	RRI1	Q12468	440 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YPR145C-A	Q2V2P0	78 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	ECM29	P38737	1868 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	CDC7	P06243	507 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	PUT1	P09368	476 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	THI80	P35202	319 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	YBR284W	P38150	797 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	SOH1	P38633	127 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	ALG8	P40351	577 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	NIT1	P40447	199 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	AIR1	P40507	360 aa	Known RBP	4.93	□□□□□ -1.62
NRD1	YNL251C	IDP2	P41939	412 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	QRI7	P43122	407 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	MNN10	P50108	393 aa	Known RBP	4.93	□□□□□ -1.62
NRD1	YNL251C	EXG2	P52911	562 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	COS12	P53053	380 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	ARG5,6	Q01217	863 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	KIN4	Q01919	800 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	TPP1	Q03796	238 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	CAC2	Q04199	468 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	SPG3	Q04398	127 aa	Predicted RBP	4.93	□□□□□ -1.62
NRD1	YNL251C	RRP45	Q05636	305 aa	Known RBP	4.93	□□□□□ -1.62
NRD1	YNL251C	ATG38	Q05789	226 aa	Known RBP	4.93	□□□□□ -1.62
NRD1	YNL251C	HBT1	Q07653	1046 aa	Known RBP	4.93	□□□□□ -1.62
NRD1	YNL251C	YPD1	Q07688	167 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	GRC3	Q07845	632 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	PML1	Q07930	204 aa	Predicted RBP	4.93	□□□□□ -1.62
NRD1	YNL251C	BSC1	Q12140	328 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	YPL066W	Q12194	479 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	MHT1	Q12525	324 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	YLR149C	Q99296	730 aa		4.93	□□□□□ -1.62
NRD1	YNL251C	MER1	P16523	270 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	MRP17	P28778	131 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	ECT1	P33412	323 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	CTF13	P35203	478 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	RMA1	P36001	430 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	YNK1	P36010	153 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	ASP1	P38986	381 aa	Predicted RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	RPS26A	P39938	119 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	RPS26B	P39939	119 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	IST3	P40565	148 aa	Predicted RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	CDC1	P40986	491 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	CAT5	P41735	233 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	POP1	P41812	875 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	PAM16	P42949	149 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	RAD17	P48581	401 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	PKP2	P53170	491 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	SYF2	P53277	215 aa	Predicted RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	FMP41	P53889	259 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	NRK1	P53915	240 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	PLM2	Q04383	521 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	SMA2	Q04658	369 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	HRD3	Q05787	833 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	SDO1	Q07953	250 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	TMS1	Q12116	473 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	PAA1	Q12447	191 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	YCL012C	Q8J0M4	134 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	COX3	P00420	269 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	CDC9	P04819	755 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	PRB1	P09232	635 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	CDC34	P14682	295 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	GLN3	P18494	730 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	SEC22	P22214	214 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	MRPL8	P22353	238 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	RSA4	P25382	515 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	POF1	P25576	258 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	ITR1	P30605	584 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	FUN26	P31381	517 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	SFK1	P35735	353 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	SHE3	P38272	425 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	MEP1	P40260	492 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	YJR111C	P47148	283 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	NIT3	P49954	291 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	ASI3	P53983	676 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	RIP-Chip
NRD1	YNL251C	MRPS17	Q03246	237 aa	Predicted RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	RIM13	Q03792	727 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	VBA4	Q04602	768 aa	Known RBP	4.92	□□□□□ -1.62
NRD1	YNL251C	HOF1	Q05080	669 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	KEI1	Q06346	221 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	IPK1	Q06667	281 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	MET32	Q12041	191 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	GLO4	Q12320	285 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	PCL9	Q12477	304 aa		4.92	□□□□□ -1.62
NRD1	YNL251C	QCR7	P00128	127 aa		4.91	□□□□□ -1.62
NRD1	YNL251C	RPB3	P16370	318 aa	Known RBP	4.91	□□□□□ -1.62
NRD1	YNL251C	PDA1	P16387	420 aa	Known RBP	4.91	□□□□□ -1.62
NRD1	YNL251C	EXG1	P23776	448 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms