RNA–Protein interactions for RNA: YMR213W

CEF1, Transcript of Essential splicing factor, yeast

Gene CEF1, Length 1,773 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CEF1	YMR213W	HEM2	P05373	342 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	SIR2	P06700	562 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	RPL31A	P0C2H8	113 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	RPL31B	P0C2H9	113 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	CKA1	P15790	372 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	PDX1	P16451	410 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	SAM2	P19358	384 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	RRP7	P25368	297 aa	Predicted RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	PMI40	P29952	429 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	MRP4	P32902	394 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	SCD5	P34758	872 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	SDH4	P37298	181 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	FLR1	P38124	548 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	RTC2	P38279	296 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	MTC4	P38335	694 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	SSH1	P38353	490 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	HSE1	P38753	452 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	PIC2	P40035	300 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	MPM1	P40364	252 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	IRC7	P43623	340 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	HMS2	P47175	358 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	BUD9	P53226	547 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	VOA1	P53262	265 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	MPA43	P53583	542 aa	Predicted RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	YNL165W	P53891	406 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	GPI15	P53961	229 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	ASI3	P53983	676 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	KTR6	P54070	446 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	NRT1	Q08485	598 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	FDH1	Q08911	376 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	MRX4	Q12467	430 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	ERD2	P18414	219 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	TRX2	P22803	104 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	RPD3	P32561	433 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	VPH1	P32563	840 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	SPS19	P32573	292 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	LIP5	P32875	414 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	YPT7	P32939	208 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	COS9	P36034	407 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	GMH1	P36125	273 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	GPT2	P36148	743 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	MRPL28	P36527	147 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	DTR1	P38125	572 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	EHT1	P38295	451 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	SRP68	P38687	599 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	YHR035W	P38769	630 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	GIM4	P40005	111 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	MAF1	P41910	395 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	AGX1	P43567	385 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	YGR127W	P53275	312 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	FMP41	P53889	259 aa	Known RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	IBD2	P53892	351 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	YNL018C	P53976	612 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	MSS11	Q03825	758 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	CUE4	Q04201	117 aa	Predicted RBP	5.93	□□□□□ -1.46
CEF1	YMR213W	PUS5	Q06244	254 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	FRQ1	Q06389	190 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	GIS3	Q12418	502 aa		5.93	□□□□□ -1.46
CEF1	YMR213W	HKR1	P41809	1802 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	RAS2	P01120	322 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	RPL9A	P05738	191 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	SAM1	P10659	382 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	RPL4A	P10664	362 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	YPK1	P12688	680 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	CAF20	P12962	161 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	SDH2	P21801	266 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	PRE1	P22141	198 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	MSN1	P22148	382 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	AAT2	P23542	418 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	PRE8	P23639	250 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	SUA5	P32579	426 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	ASC1	P38011	319 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	LRP1	P38801	184 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	YHR122W	P38829	231 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	PEX28	P38848	579 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	PHO90	P39535	881 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	SLZ1	P40167	298 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	GAT2	P40209	560 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	FIS1	P40515	155 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	LOC1	P43586	204 aa	Predicted RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	RPL4B	P49626	362 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	RPL9B	P51401	191 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	SAY1	P53324	424 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	BRE5	P53741	515 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	EMI1	Q04406	187 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	MRI1	Q06489	411 aa	Known RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	MRPL35	Q06678	367 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	RFU1	Q08003	200 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	YPL272C	Q08984	517 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	RTK1	Q12100	620 aa	Predicted RBP	5.92	□□□□□ -1.46
CEF1	YMR213W	RRI1	Q12468	440 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	SKS1	Q12505	502 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	PCD1	Q12524	340 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	COA6	Q3E846	104 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	YLR422W	Q06409	1932 aa		5.92	□□□□□ -1.46
CEF1	YMR213W	CPR4	P25334	318 aa		5.91	□□□□□ -1.46
CEF1	YMR213W	ARE1	P25628	610 aa		5.91	□□□□□ -1.46
CEF1	YMR213W	GSP1	P32835	219 aa	Known RBP	5.91	□□□□□ -1.46
CEF1	YMR213W	GSP2	P32836	220 aa	Known RBP	5.91	□□□□□ -1.46
CEF1	YMR213W	SNC2	P33328	115 aa		5.91	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms