RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W RAD33Q04231 177 aa2.17□□□□□ -2.06
SMC6YLR383W MRPL51Q06090 140 aaPredicted RBP2.17□□□□□ -2.06
SMC6YLR383W SYO1Q07395 620 aa2.17□□□□□ -2.06
SMC6YLR383W YOL159CQ08300 171 aa2.17□□□□□ -2.06
SMC6YLR383W NIP7Q08962 181 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W SSA3P09435 649 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W COS2P0CX12 379 aa2.17□□□□□ -2.06
SMC6YLR383W COS3P0CX13 379 aa2.17□□□□□ -2.06
SMC6YLR383W RPL1AP0CX43 217 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W RPL1BP0CX44 217 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W YAP1P19880 650 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W BOS1P25385 244 aa2.17□□□□□ -2.06
SMC6YLR383W SIN4P32259 974 aa2.17□□□□□ -2.06
SMC6YLR383W YME2P32843 850 aa2.17□□□□□ -2.06
SMC6YLR383W ECT1P33412 323 aa2.17□□□□□ -2.06
SMC6YLR383W OMA1P36163 345 aa2.17□□□□□ -2.06
SMC6YLR383W YHR097CP38809 366 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W SEC31P38968 1273 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W COS4P43542 379 aa2.17□□□□□ -2.06
SMC6YLR383W RMR1P53060 241 aa2.17□□□□□ -2.06
SMC6YLR383W EMC4P53073 190 aa2.17□□□□□ -2.06
SMC6YLR383W USE1P53146 245 aa2.17□□□□□ -2.06
SMC6YLR383W TWF1P53250 332 aa2.17□□□□□ -2.06
SMC6YLR383W NRG1Q03125 231 aa2.17□□□□□ -2.06
SMC6YLR383W RIM13Q03792 727 aa2.17□□□□□ -2.06
SMC6YLR383W DIA2Q08496 732 aaPredicted RBP2.17□□□□□ -2.06
SMC6YLR383W RTC5Q12108 567 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W CHS5Q12114 671 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W TAD3Q9URQ3 322 aa2.17□□□□□ -2.06
SMC6YLR383W FLO9P39712 1322 aa2.17□□□□□ -2.06
SMC6YLR383W CDC21P06785 304 aa2.17□□□□□ -2.06
SMC6YLR383W BCY1P07278 416 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W CKA1P15790 372 aa2.17□□□□□ -2.06
SMC6YLR383W PRP28P23394 588 aa2.17□□□□□ -2.06
SMC6YLR383W YIM1P28625 365 aa2.17□□□□□ -2.06
SMC6YLR383W ECM10P39987 644 aa2.17□□□□□ -2.06
SMC6YLR383W RIO2P40160 425 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W TOM22P49334 152 aa2.17□□□□□ -2.06
SMC6YLR383W BSC5P53755 489 aa2.17□□□□□ -2.06
SMC6YLR383W SMX3P54999 86 aaPredicted RBP2.17□□□□□ -2.06
SMC6YLR383W REG1Q00816 1014 aa2.17□□□□□ -2.06
SMC6YLR383W NCE101Q02820 53 aa2.17□□□□□ -2.06
SMC6YLR383W RPN9Q04062 393 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W DCR2Q05924 578 aa2.17□□□□□ -2.06
SMC6YLR383W MDM36Q06820 579 aa2.17□□□□□ -2.06
SMC6YLR383W MED7Q08278 222 aa2.17□□□□□ -2.06
SMC6YLR383W LDB17Q12342 491 aa2.17□□□□□ -2.06
SMC6YLR383W FRE6Q12473 712 aa2.17□□□□□ -2.06
SMC6YLR383W PNO1Q99216 274 aaKnown RBP2.17□□□□□ -2.06
SMC6YLR383W ARG3P05150 338 aa2.16□□□□□ -2.06
SMC6YLR383W TPK3P05986 398 aa2.16□□□□□ -2.06
SMC6YLR383W LEU4P06208 619 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W PET122P10355 254 aa2.16□□□□□ -2.06
SMC6YLR383W ZUO1P32527 433 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W MTH1P35198 433 aa2.16□□□□□ -2.06
SMC6YLR383W MRPL17P36528 281 aa2.16□□□□□ -2.06
SMC6YLR383W TAE1P38340 232 aa2.16□□□□□ -2.06
SMC6YLR383W ANS1P38832 159 aa2.16□□□□□ -2.06
SMC6YLR383W RTT105P40063 208 aa2.16□□□□□ -2.06
SMC6YLR383W SLZ1P40167 298 aa2.16□□□□□ -2.06
SMC6YLR383W SGN1P40561 250 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SMC6YLR383W EMC2P47133 292 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W ILM1P47155 203 aa2.16□□□□□ -2.06
SMC6YLR383W YNL033WP53964 284 aa2.16□□□□□ -2.06
SMC6YLR383W YNL019CP53975 284 aa2.16□□□□□ -2.06
SMC6YLR383W ARX1Q03862 593 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W HOF1Q05080 669 aa2.16□□□□□ -2.06
SMC6YLR383W DBP9Q06218 594 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W NDL1Q06568 189 aa2.16□□□□□ -2.06
SMC6YLR383W RXT3Q07458 294 aa2.16□□□□□ -2.06
SMC6YLR383W RRP40Q08285 240 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W RTN2Q12443 393 aa2.16□□□□□ -2.06
SMC6YLR383W GPH1P06738 902 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W FBA1P14540 359 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W MCK1P21965 375 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W APN1P22936 367 aa2.16□□□□□ -2.06
SMC6YLR383W KRR1P25586 316 aaPredicted RBP2.16□□□□□ -2.06
SMC6YLR383W NAM9P27929 486 aa2.16□□□□□ -2.06
SMC6YLR383W MSN2P33748 704 aa2.16□□□□□ -2.06
SMC6YLR383W VPS21P36017 210 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W SRO77P38163 1010 aa2.16□□□□□ -2.06
SMC6YLR383W AIM3P38266 947 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W YBR285WP38354 144 aa2.16□□□□□ -2.06
SMC6YLR383W YJL193WP39542 402 aa2.16□□□□□ -2.06
SMC6YLR383W BUR6P40096 142 aa2.16□□□□□ -2.06
SMC6YLR383W ATF1P40353 525 aa2.16□□□□□ -2.06
SMC6YLR383W SDT1P53078 280 aa2.16□□□□□ -2.06
SMC6YLR383W ROG1P53118 685 aa2.16□□□□□ -2.06
SMC6YLR383W YGL101WP53144 215 aa2.16□□□□□ -2.06
SMC6YLR383W RRP45Q05636 305 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W ARV1Q06541 321 aa2.16□□□□□ -2.06
SMC6YLR383W YDL242WQ07746 117 aa2.16□□□□□ -2.06
SMC6YLR383W YLR040CQ07988 224 aa2.16□□□□□ -2.06
SMC6YLR383W MCH4Q08268 501 aa2.16□□□□□ -2.06
SMC6YLR383W RUP1Q12242 671 aa2.16□□□□□ -2.06
SMC6YLR383W ERD1P16151 362 aa2.16□□□□□ -2.06
SMC6YLR383W TYR1P20049 452 aa2.16□□□□□ -2.06
SMC6YLR383W SGV1P23293 657 aaKnown RBP2.16□□□□□ -2.06
SMC6YLR383W POL4P25615 582 aa2.16□□□□□ -2.06
SMC6YLR383W GDT1P38301 280 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms