RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	TPK2	P06245	380 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-LR1	P0C2J4	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-F	P0CX61	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-GR2	P0CX62	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	MRP13	P12686	339 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	PET9	P18239	318 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	CCA1	P21269	546 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	CLB2	P24869	491 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-C	P25383	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	ATG22	P25568	528 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	PRE4	P30657	266 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	ARO4	P32449	370 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	HES1	P35843	434 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	PRS2	P38620	318 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	RFC4	P40339	323 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	SDT1	P53078	280 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	YGL159W	P53110	370 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	MRP51	Q02950	344 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-DR2	Q03483	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	EFR3	Q03653	782 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	PLM2	Q04383	521 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	STP3	Q05937	343 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	GPN3	Q06543	272 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	RAX1	Q08760	435 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	YOL107W	Q12239	342 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-B	Q12260	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-OR2	Q12293	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-DR1	Q12392	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-OR1	Q12439	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	TY2A-DR3	Q99303	438 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	QCR2	P07257	368 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	STE4	P18851	423 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	HXT2	P23585	541 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	SLM5	P25345	492 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	CSM1	P25651	190 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	PMT2	P31382	759 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	DAL3	P32459	195 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	CDC5	P32562	705 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	PET127	P32606	800 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	SLC1	P33333	303 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	APT2	P36973	181 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	GLY1	P37303	387 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	ICS2	P38284	255 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	VRG4	P40107	337 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	FMC1	P40491	155 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	MAD2	P40958	196 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	NIT2	P47016	307 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	SCY1	P53009	804 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	PKP2	P53170	491 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	FHN1	P53279	174 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	YMR279C	Q03263	540 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	HSP31	Q04432	237 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	YHC1	Q05900	231 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	YEH1	Q07804	573 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	NGL1	Q08213	363 aa	Known RBP	4.58	□□□□□ -1.68
DOA1	YKL213C	GSH2	Q08220	491 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	BAG7	Q12128	409 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	RUP1	Q12242	671 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	Q0010	Q9ZZX9	128 aa		4.58	□□□□□ -1.68
DOA1	YKL213C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
DOA1	YKL213C	AIM17	P23180	465 aa	Known RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	PRP21	P32524	280 aa	Predicted RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	IST2	P38250	946 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	EHT1	P38295	451 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	YHR112C	P38716	378 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	NVJ1	P38881	321 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	RPE1	P46969	238 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	MUP1	P50276	574 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	BIO3	P50277	480 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	DIA3	P52290	468 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	DID2	P69771	204 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	RRP40	Q08285	240 aa	Known RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	SNF8	Q12483	233 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	NFT1	P0CE68	1218 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	MRP2	P10663	115 aa	Predicted RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	OLE1	P21147	510 aa	Known RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	DAL82	P21705	255 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	BUD5	P25300	642 aa	Predicted RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	IDH2	P28241	369 aa	Known RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	LAC1	P28496	418 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	TFC1	P32367	649 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	HOG1	P32485	435 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	AST1	P35183	429 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	ASC1	P38011	319 aa	Known RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	ROT2	P38138	954 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	FAT1	P38225	669 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	AST2	P39945	430 aa	Known RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	PIC2	P40035	300 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	PRM10	P42946	383 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	UFD1	P53044	361 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	ACL4	Q03771	387 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	YMR226C	Q05016	267 aa	Known RBP	4.57	□□□□□ -1.68
DOA1	YKL213C	ZEO1	Q08245	113 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	IRC13	Q08630	104 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	MLH3	Q12083	715 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	YDR061W	Q12298	539 aa		4.57	□□□□□ -1.68
DOA1	YKL213C	BRR2	P32639	2163 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	ATP2	P00830	511 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	ADE5,7	P07244	802 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	RIP1	P08067	215 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms