RNA–Protein interactions for RNA: YIR044C

YIR044C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR044C, Length 186 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR044C	YIR044C	ASG7	P46993	209 aa		0.96	□□□□□ -2.26
YIR044C	YIR044C	EFM3	P47163	339 aa		0.96	□□□□□ -2.26
YIR044C	YIR044C	CWC22	P53333	577 aa	Known RBP	0.96	□□□□□ -2.26
YIR044C	YIR044C	UTP15	Q04305	513 aa	Known RBP	0.96	□□□□□ -2.26
YIR044C	YIR044C	YMR111C	Q04461	462 aa	Predicted RBP	0.96	□□□□□ -2.26
YIR044C	YIR044C	YDR018C	Q12185	396 aa		0.96	□□□□□ -2.26
YIR044C	YIR044C	MHP1	P43638	1398 aa		0.96	□□□□□ -2.26
YIR044C	YIR044C	RPS23A	P0CX29	145 aa	Known RBP	0.95	□□□□□ -2.26
YIR044C	YIR044C	RPS23B	P0CX30	145 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	CPT1	P17898	393 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	RDS1	P25611	832 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.95	□□□□□ -2.26	not detected
YIR044C	YIR044C	AST1	P35183	429 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	FRM2	P37261	193 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	PCH2	P38126	564 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	MMS21	P38632	267 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	FRT2	P39734	528 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	RPA34	P47006	233 aa	Predicted RBP	0.95	□□□□□ -2.26
YIR044C	YIR044C	CPR7	P47103	393 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	YDR286C	Q05530	114 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	ECM19	Q06011	112 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	PSY3	Q12318	242 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	LDB17	Q12342	491 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	HIF1	Q12373	385 aa		0.95	□□□□□ -2.26
YIR044C	YIR044C	REP1	P03871	373 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	CTA1	P15202	515 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	HMX1	P32339	317 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	VPH1	P32563	840 aa	Known RBP	0.94	□□□□□ -2.26
YIR044C	YIR044C	SMI1	P32566	505 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	YKL071W	P36086	256 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	YBR062C	P38239	180 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	SHE3	P38272	425 aa	Known RBP	0.94	□□□□□ -2.26
YIR044C	YIR044C	TRR2	P38816	342 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	YIL089W	P40500	205 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	NAS2	P40555	220 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	PXR1	P53335	271 aa	Predicted RBP	0.94	□□□□□ -2.26
YIR044C	YIR044C	SED5	Q01590	340 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	RCF1	Q03713	159 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	INP2	Q03824	705 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	BUR2	Q05949	395 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	ALE1	Q08548	619 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	SKS1	Q12505	502 aa		0.94	□□□□□ -2.26
YIR044C	YIR044C	RPL18A	P0CX49	186 aa	Known RBP	0.93	□□□□□ -2.26
YIR044C	YIR044C	RPL18B	P0CX50	186 aa	Known RBP	0.93	□□□□□ -2.26
YIR044C	YIR044C	TAL1	P15019	335 aa	Known RBP	0.93	□□□□□ -2.26
YIR044C	YIR044C	IME2	P32581	645 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	SWI3	P32591	825 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	TIP20	P33891	701 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	RFT1	P38206	574 aa	Predicted RBP	0.93	□□□□□ -2.26
YIR044C	YIR044C	RRG9	P40156	214 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	YIR035C	P40579	254 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	UFE1	P41834	346 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	YGL114W	P53134	725 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	CAX4	P53223	239 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	HCH1	P53834	153 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	YNL146W	P53906	100 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	ABZ2	Q03266	374 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	GTO3	Q04806	366 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	FAR10	Q06001	478 aa		0.93	□□□□□ -2.26
YIR044C	YIR044C	VPS63	O13549	108 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	ERD1	P16151	362 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	CDC42	P19073	191 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	KTI12	P34253	313 aa	Known RBP	0.92	□□□□□ -2.26
YIR044C	YIR044C	APE4	P38821	490 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	YHR122W	P38829	231 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	BTT1	P40314	149 aa	Predicted RBP	0.92	□□□□□ -2.26
YIR044C	YIR044C	COS4	P43542	379 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	PMT4	P46971	762 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	YGL118C	P53132	145 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	RPN14	P53196	417 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	YGR168C	P53293	376 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	SMD1	Q02260	146 aa	Predicted RBP	0.92	□□□□□ -2.26
YIR044C	YIR044C	YPL080C	Q02826	108 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	HRT1	Q08273	121 aa		0.92	□□□□□ -2.26
YIR044C	YIR044C	DFM1	Q12743	341 aa	Known RBP	0.92	□□□□□ -2.26
YIR044C	YIR044C	YCR025C	P25352	136 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	PPQ1	P32945	549 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	YKL162C	P36052	402 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	RCK1	P38622	512 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	YER188W	P40103	239 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	AIM20	P40451	204 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	RRB1	Q04225	511 aa	Known RBP	0.91	□□□□□ -2.26
YIR044C	YIR044C	STE23	Q06010	1027 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	SPH1	Q06160	661 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	DXO1	Q06349	442 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	PBP4	Q07362	185 aa	Known RBP	0.91	□□□□□ -2.26
YIR044C	YIR044C	YPL278C	Q08990	100 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	RGS2	Q99188	309 aa		0.91	□□□□□ -2.26
YIR044C	YIR044C	HSP82	P02829	709 aa	Known RBP	0.9	□□□□□ -2.27
YIR044C	YIR044C	ERG9	P29704	444 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	YPS1	P32329	569 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	MEI5	P32489	222 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	RAD23	P32628	398 aa	Known RBP	0.9	□□□□□ -2.27
YIR044C	YIR044C	SUR1	P33300	382 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	SRB2	P34162	210 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	YBL081W	P38180	368 aa	Known RBP	0.9	□□□□□ -2.27
YIR044C	YIR044C	PEX32	P38292	413 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	YPC1	P38298	316 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	MED6	P38782	295 aa		0.9	□□□□□ -2.27
YIR044C	YIR044C	YER084W	P40057	128 aa		0.9	□□□□□ -2.27

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