RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YIL166CP40445 542 aa3.45□□□□□ -1.86
SPT6YGR116W SNM1P40993 198 aa3.45□□□□□ -1.86
SPT6YGR116W CAT5P41735 233 aa3.45□□□□□ -1.86
SPT6YGR116W VPS73P53142 486 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W ERV14P53173 138 aa3.45□□□□□ -1.86
SPT6YGR116W ARG5,6Q01217 863 aa3.45□□□□□ -1.86
SPT6YGR116W MRPS17Q03246 237 aaPredicted RBP3.45□□□□□ -1.86
SPT6YGR116W CCE1Q03702 353 aa3.45□□□□□ -1.86
SPT6YGR116W UTP15Q04305 513 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W ELP6Q04868 273 aa3.45□□□□□ -1.86
SPT6YGR116W PEX30Q06169 523 aa3.45□□□□□ -1.86
SPT6YGR116W YPR127WQ06494 345 aa3.45□□□□□ -1.86
SPT6YGR116W CDA2Q06703 312 aa3.45□□□□□ -1.86
SPT6YGR116W BRX1Q08235 291 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W CAN1P04817 590 aa3.45□□□□□ -1.86
SPT6YGR116W APN1P22936 367 aa3.45□□□□□ -1.86
SPT6YGR116W PBN1P25580 416 aa3.45□□□□□ -1.86
SPT6YGR116W EMP24P32803 203 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W MRPL4P36517 319 aa3.45□□□□□ -1.86
SPT6YGR116W DTR1P38125 572 aa3.45□□□□□ -1.86
SPT6YGR116W ALG3P38179 458 aa3.45□□□□□ -1.86
SPT6YGR116W MTC4P38335 694 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W SDP1P40479 209 aa3.45□□□□□ -1.86
SPT6YGR116W CSN12P47130 423 aa3.45□□□□□ -1.86
SPT6YGR116W BUL1P48524 976 aa3.45□□□□□ -1.86
SPT6YGR116W YDR132CQ03900 495 aa3.45□□□□□ -1.86
SPT6YGR116W TY1A-DR2Q03964 440 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W PUN1Q06991 263 aa3.45□□□□□ -1.86
SPT6YGR116W SDO1Q07953 250 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W SCP1Q08873 200 aa3.45□□□□□ -1.86
SPT6YGR116W TYW1Q08960 810 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W YDL007C-AQ2V2Q0 85 aa3.45□□□□□ -1.86
SPT6YGR116W YLR149CQ99296 730 aa3.45□□□□□ -1.86
SPT6YGR116W HTS1P07263 546 aaKnown RBP3.44□□□□□ -1.86
SPT6YGR116W EMC5P40540 141 aa3.44□□□□□ -1.86
SPT6YGR116W MAD2P40958 196 aa3.44□□□□□ -1.86
SPT6YGR116W TES1P41903 349 aaKnown RBP3.44□□□□□ -1.86
SPT6YGR116W YNR062CP53748 327 aa3.44□□□□□ -1.86
SPT6YGR116W YLR012CQ07927 99 aa3.44□□□□□ -1.86
SPT6YGR116W YPR022CQ12139 1133 aa3.44□□□□□ -1.86
SPT6YGR116W YAR066WP0CX18 203 aa3.44□□□□□ -1.86
SPT6YGR116W YHR214WP0CX19 203 aa3.44□□□□□ -1.86
SPT6YGR116W SDH2P21801 266 aa3.44□□□□□ -1.86
SPT6YGR116W POF1P25576 258 aa3.44□□□□□ -1.86
SPT6YGR116W CTS1P29029 562 aa3.44□□□□□ -1.86
SPT6YGR116W SUA5P32579 426 aa3.44□□□□□ -1.86
SPT6YGR116W PAU2P32612 120 aa3.44□□□□□ -1.86
SPT6YGR116W SFA1P32771 386 aa3.44□□□□□ -1.86
SPT6YGR116W ORC2P32833 620 aa3.44□□□□□ -1.86
SPT6YGR116W SFK1P35735 353 aa3.44□□□□□ -1.86
SPT6YGR116W ATG8P38182 117 aaRIP-Chip data3.44□□□□□ -1.86not detected
SPT6YGR116W GND1P38720 489 aaKnown RBP3.44□□□□□ -1.86
SPT6YGR116W YJL068CP40363 299 aa3.44□□□□□ -1.86
SPT6YGR116W MUP1P50276 574 aa3.44□□□□□ -1.86
SPT6YGR116W FMP41P53889 259 aaKnown RBP3.44□□□□□ -1.86
SPT6YGR116W YPL108WQ02872 168 aaPredicted RBP3.44□□□□□ -1.86
SPT6YGR116W RNH202Q05635 350 aa3.44□□□□□ -1.86
SPT6YGR116W TEN1Q07921 160 aa3.44□□□□□ -1.86
SPT6YGR116W PML1Q07930 204 aaPredicted RBP3.44□□□□□ -1.86
SPT6YGR116W HMS1Q12398 434 aa3.44□□□□□ -1.86
SPT6YGR116W COA6Q3E846 104 aa3.44□□□□□ -1.86
SPT6YGR116W CDC9P04819 755 aa3.44□□□□□ -1.86
SPT6YGR116W SWI5P08153 709 aa3.44□□□□□ -1.86
SPT6YGR116W MRPL15P36523 253 aa3.44□□□□□ -1.86
SPT6YGR116W SSN3P39073 555 aa3.44□□□□□ -1.86
SPT6YGR116W UBX6P47049 396 aa3.44□□□□□ -1.86
SPT6YGR116W DOC1P53068 250 aa3.44□□□□□ -1.86
SPT6YGR116W YGL101WP53144 215 aa3.44□□□□□ -1.86
SPT6YGR116W BIO5P53744 561 aaKnown RBP3.44□□□□□ -1.86
SPT6YGR116W OST6Q03723 332 aa3.44□□□□□ -1.86
SPT6YGR116W MPD2Q99316 277 aa3.44□□□□□ -1.86
SPT6YGR116W HIS5P07172 385 aa3.44□□□□□ -1.86
SPT6YGR116W MRPL8P22353 238 aa3.44□□□□□ -1.86
SPT6YGR116W MGR1P25573 417 aa3.44□□□□□ -1.86
SPT6YGR116W AVT5P38176 459 aa3.44□□□□□ -1.86
SPT6YGR116W VPS52P39904 641 aa3.44□□□□□ -1.86
SPT6YGR116W BAT2P47176 376 aaKnown RBP3.44□□□□□ -1.86
SPT6YGR116W RTS3P53289 263 aa3.44□□□□□ -1.86
SPT6YGR116W HCH1P53834 153 aa3.44□□□□□ -1.86
SPT6YGR116W DPB4Q04603 196 aaKnown RBP3.44□□□□□ -1.86
SPT6YGR116W INP53Q12271 1107 aa3.44□□□□□ -1.86
SPT6YGR116W TY1A-DR3Q12441 440 aa3.44□□□□□ -1.86
SPT6YGR116W FRE6Q12473 712 aa3.44□□□□□ -1.86
SPT6YGR116W RPS31P05759 152 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W YOL163WP0CF20 169 aa3.43□□□□□ -1.86
SPT6YGR116W UBI4P0CG63 381 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W RPL40AP0CH08 128 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W RPL40BP0CH09 128 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W HOM2P13663 365 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W YHR177WP38867 453 aa3.43□□□□□ -1.86
SPT6YGR116W MNT3P40549 630 aa3.43□□□□□ -1.86
SPT6YGR116W UFE1P41834 346 aa3.43□□□□□ -1.86
SPT6YGR116W YJR149WP47177 404 aa3.43□□□□□ -1.86
SPT6YGR116W RSM27P53305 110 aa3.43□□□□□ -1.86
SPT6YGR116W FRE4P53746 719 aa3.43□□□□□ -1.86
SPT6YGR116W APM1Q00776 475 aaPredicted RBP3.43□□□□□ -1.86
SPT6YGR116W IRC10Q08118 586 aa3.43□□□□□ -1.86
SPT6YGR116W BMT6Q12291 365 aa3.43□□□□□ -1.86
SPT6YGR116W HAP2P06774 265 aa3.43□□□□□ -1.86
SPT6YGR116W CAR2P07991 424 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms