RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A CHA4P43634 648 aa8.28□□□□□ -1.08
LSB3YFR024C-A MDE1P47095 244 aa8.28□□□□□ -1.08
LSB3YFR024C-A TFB3Q03290 321 aa8.28□□□□□ -1.08
LSB3YFR024C-A YMR226CQ05016 267 aaKnown RBP8.28□□□□□ -1.08
LSB3YFR024C-A SNT309Q06091 175 aaPredicted RBP8.28□□□□□ -1.08
LSB3YFR024C-A EMG1Q06287 252 aaKnown RBP8.28□□□□□ -1.08
LSB3YFR024C-A RIB3Q99258 208 aa8.28□□□□□ -1.08
LSB3YFR024C-A PEP4P07267 405 aaKnown RBP8.27□□□□□ -1.09
LSB3YFR024C-A MDH2P22133 377 aa8.27□□□□□ -1.09
LSB3YFR024C-A PRP28P23394 588 aa8.27□□□□□ -1.09
LSB3YFR024C-A BUD5P25300 642 aaPredicted RBP8.27□□□□□ -1.09
LSB3YFR024C-A YKL071WP36086 256 aa8.27□□□□□ -1.09
LSB3YFR024C-A DAM1P53267 343 aa8.27□□□□□ -1.09
LSB3YFR024C-A YGR126WP53274 230 aa8.27□□□□□ -1.09
LSB3YFR024C-A MPP6P53725 186 aaPredicted RBP8.27□□□□□ -1.09
LSB3YFR024C-A YNR062CP53748 327 aa8.27□□□□□ -1.09
LSB3YFR024C-A ABZ2Q03266 374 aa8.27□□□□□ -1.09
LSB3YFR024C-A DML1Q03652 475 aa8.27□□□□□ -1.09
LSB3YFR024C-A BTS1Q12051 335 aa8.27□□□□□ -1.09
LSB3YFR024C-A YLR126CQ12288 251 aa8.27□□□□□ -1.09
LSB3YFR024C-A TAF3Q12297 353 aa8.27□□□□□ -1.09
LSB3YFR024C-A TRA1P38811 3744 aa8.27□□□□□ -1.09
LSB3YFR024C-A RPC40P07703 335 aaKnown RBP8.26□□□□□ -1.09
LSB3YFR024C-A CAR2P07991 424 aaKnown RBP8.26□□□□□ -1.09
LSB3YFR024C-A SSA3P09435 649 aaKnown RBP8.26□□□□□ -1.09
LSB3YFR024C-A DPM1P14020 267 aaKnown RBP8.26□□□□□ -1.09
LSB3YFR024C-A POL4P25615 582 aa8.26□□□□□ -1.09
LSB3YFR024C-A KRE6P32486 720 aa8.26□□□□□ -1.09
LSB3YFR024C-A PRP19P32523 503 aaKnown RBP8.26□□□□□ -1.09
LSB3YFR024C-A MSN4P33749 630 aa8.26□□□□□ -1.09
LSB3YFR024C-A NIC96P34077 839 aa8.26□□□□□ -1.09
LSB3YFR024C-A YMR262WP38430 313 aa8.26□□□□□ -1.09
LSB3YFR024C-A FET3P38993 636 aa8.26□□□□□ -1.09
LSB3YFR024C-A NAB3P38996 802 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
LSB3YFR024C-A NIT2P47016 307 aa8.26□□□□□ -1.09
LSB3YFR024C-A HSV2P50079 448 aaPredicted RBP8.26□□□□□ -1.09
LSB3YFR024C-A SOK2P53438 785 aaPredicted RBP8.26□□□□□ -1.09
LSB3YFR024C-A RSA3Q05942 220 aaKnown RBP8.26□□□□□ -1.09
LSB3YFR024C-A LOT6Q07923 191 aa8.26□□□□□ -1.09
LSB3YFR024C-A SET6Q12529 373 aa8.26□□□□□ -1.09
LSB3YFR024C-A YAL064W-BO13512 126 aa8.25□□□□□ -1.09
LSB3YFR024C-A ATR1P13090 542 aa8.25□□□□□ -1.09
LSB3YFR024C-A PTP2P29461 750 aa8.25□□□□□ -1.09
LSB3YFR024C-A MAE1P36013 669 aaKnown RBP8.25□□□□□ -1.09
LSB3YFR024C-A CHK1P38147 527 aa8.25□□□□□ -1.09
LSB3YFR024C-A SLM4P38247 162 aa8.25□□□□□ -1.09
LSB3YFR024C-A GDI1P39958 451 aaKnown RBP8.25□□□□□ -1.09
LSB3YFR024C-A YGL101WP53144 215 aa8.25□□□□□ -1.09
LSB3YFR024C-A SNF12P53628 566 aa8.25□□□□□ -1.09
LSB3YFR024C-A COS1P53822 381 aa8.25□□□□□ -1.09
LSB3YFR024C-A PLB2Q03674 706 aa8.25□□□□□ -1.09
LSB3YFR024C-A MRPL1Q04599 285 aa8.25□□□□□ -1.09
LSB3YFR024C-A VBA4Q04602 768 aaKnown RBP8.25□□□□□ -1.09
LSB3YFR024C-A SNO4Q04902 237 aa8.25□□□□□ -1.09
LSB3YFR024C-A HSP33Q08914 237 aaKnown RBP8.25□□□□□ -1.09
LSB3YFR024C-A HSP32Q08992 237 aa8.25□□□□□ -1.09
LSB3YFR024C-A WTM2Q12206 467 aa8.25□□□□□ -1.09
LSB3YFR024C-A YOR343CQ12484 108 aa8.25□□□□□ -1.09
LSB3YFR024C-A CDC36P06100 191 aaPredicted RBP8.24□□□□□ -1.09
LSB3YFR024C-A SNF6P18888 332 aa8.24□□□□□ -1.09
LSB3YFR024C-A RFC4P40339 323 aaKnown RBP8.24□□□□□ -1.09
LSB3YFR024C-A POP1P41812 875 aa8.24□□□□□ -1.09
LSB3YFR024C-A EXG2P52911 562 aa8.24□□□□□ -1.09
LSB3YFR024C-A ASI1P54074 624 aa8.24□□□□□ -1.09
LSB3YFR024C-A SCS7Q03529 384 aa8.24□□□□□ -1.09
LSB3YFR024C-A UIP4Q08926 304 aa8.24□□□□□ -1.09
LSB3YFR024C-A SPC3Q12133 184 aa8.24□□□□□ -1.09
LSB3YFR024C-A TFS1P14306 219 aa8.23□□□□□ -1.09
LSB3YFR024C-A RPB8P20436 146 aa8.23□□□□□ -1.09
LSB3YFR024C-A YKL077WP36081 392 aa8.23□□□□□ -1.09
LSB3YFR024C-A MRPL39P36533 70 aa8.23□□□□□ -1.09
LSB3YFR024C-A RPP1P38786 293 aa8.23□□□□□ -1.09
LSB3YFR024C-A RIX1P38883 763 aaPredicted RBP8.23□□□□□ -1.09
LSB3YFR024C-A MSY1P48527 492 aa8.23□□□□□ -1.09
LSB3YFR024C-A VMA10P48836 114 aaKnown RBP8.23□□□□□ -1.09
LSB3YFR024C-A LYS5P50113 272 aa8.23□□□□□ -1.09
LSB3YFR024C-A YNR040WP53736 256 aa8.23□□□□□ -1.09
LSB3YFR024C-A YPR147CQ06522 304 aaKnown RBP8.23□□□□□ -1.09
LSB3YFR024C-A NIP7Q08962 181 aaKnown RBP8.23□□□□□ -1.09
LSB3YFR024C-A YDL007C-AQ2V2Q0 85 aa8.23□□□□□ -1.09
LSB3YFR024C-A MCM1P11746 286 aa8.22□□□□□ -1.09
LSB3YFR024C-A MAK32P23060 363 aa8.22□□□□□ -1.09
LSB3YFR024C-A PRE2P30656 287 aaKnown RBP8.22□□□□□ -1.09
LSB3YFR024C-A RPC82P32349 654 aa8.22□□□□□ -1.09
LSB3YFR024C-A RPS20P38701 121 aaKnown RBP8.22□□□□□ -1.09
LSB3YFR024C-A KRE29P40026 464 aa8.22□□□□□ -1.09
LSB3YFR024C-A IRC7P43623 340 aa8.22□□□□□ -1.09
LSB3YFR024C-A COG5P53951 403 aa8.22□□□□□ -1.09
LSB3YFR024C-A YPR097WQ06839 1073 aa8.22□□□□□ -1.09
LSB3YFR024C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
LSB3YFR024C-A RCN2Q12044 265 aa8.22□□□□□ -1.09
LSB3YFR024C-A TPK3P05986 398 aa8.22□□□□□ -1.09
LSB3YFR024C-A RHO1P06780 209 aaKnown RBP8.22□□□□□ -1.09
LSB3YFR024C-A FAR1P21268 830 aa8.22□□□□□ -1.09
LSB3YFR024C-A PEP12P32854 288 aa8.22□□□□□ -1.09
LSB3YFR024C-A SBE22P38814 852 aa8.22□□□□□ -1.09
LSB3YFR024C-A RRG9P40156 214 aa8.22□□□□□ -1.09
LSB3YFR024C-A STB1P42845 420 aa8.22□□□□□ -1.09
LSB3YFR024C-A SPC19Q03954 165 aa8.22□□□□□ -1.09
LSB3YFR024C-A CRR1Q05790 422 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms