RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	DDI1	P40087	428 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	BMT5	P40493	336 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	LYS12	P40495	371 aa	Known RBP	3.77	□□□□□ -1.81
UBP6	YFR010W	IDP2	P41939	412 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	YGR201C	P42936	225 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	YFR020W	P43600	232 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	AIM24	P47127	394 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	ADO1	P47143	340 aa	Known RBP	3.77	□□□□□ -1.81
UBP6	YFR010W	AZR1	P50080	613 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	SHY1	P53266	389 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	NUP49	Q02199	472 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	YDR109C	Q04585	715 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	HCR1	Q05775	265 aa	Known RBP	3.77	□□□□□ -1.81
UBP6	YFR010W	RAD34	Q06665	692 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	YOR387C	Q08910	206 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	RRP42	Q12277	265 aa	Predicted RBP	3.77	□□□□□ -1.81
UBP6	YFR010W	TOP2	P06786	1428 aa	Known RBP	3.77	□□□□□ -1.81
UBP6	YFR010W	SSN2	P38931	1420 aa		3.77	□□□□□ -1.81
UBP6	YFR010W	SNT2	P53127	1403 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	OPI3	P05375	206 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	PET54	P10834	293 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	ZWF1	P11412	505 aa	Known RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	CPT1	P17898	393 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	RNA15	P25299	296 aa	Predicted RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	HSP30	P25619	332 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	MSS1	P32559	526 aa	Predicted RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	MRPS5	P33759	307 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	MYO3	P36006	1272 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	TCM62	P38228	572 aa	Known RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	PHO90	P39535	881 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	RTS2	P40962	232 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	JHD2	P47156	728 aa	Predicted RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	PRP24	P49960	444 aa	Known RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	VEL1	P53058	206 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	OKP1	P53298	406 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	MKC7	P53379	596 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	TMA20	P89886	181 aa	Predicted RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	TIM44	Q01852	431 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	TRM82	Q03774	444 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	YMR114C	Q04471	368 aa	Known RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	PRM6	Q04705	352 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	BCH1	Q05029	724 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	MRPL51	Q06090	140 aa	Predicted RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	YPR127W	Q06494	345 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	MFG1	Q07684	458 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	YPL225W	Q08971	146 aa	Known RBP	3.76	□□□□□ -1.81
UBP6	YFR010W	DAS2	Q12084	232 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	FCY22	Q12119	530 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	YOR114W	Q12219	294 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	JLP1	Q12358	412 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	ERP3	Q12403	225 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	WIP1	Q2V2P8	89 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	Q0144	Q9ZZW2	109 aa		3.76	□□□□□ -1.81
UBP6	YFR010W	PEP4	P07267	405 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	RPS28B	P0C0X0	67 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	KIN3	P22209	435 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	CDC5	P32562	705 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	MRPL6	P32904	214 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	PPZ2	P33329	710 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	FLO10	P36170	1169 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	PHM8	P40025	321 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	SAS2	P40963	338 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	POP1	P41812	875 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	PMT6	P42934	759 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	TRS85	P46944	698 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YJR011C	P47086	261 aa	Predicted RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	MIC26	P50087	233 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	JAC1	P53193	184 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	ERG26	P53199	349 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	GPI1	P53306	609 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YMD8	Q03697	442 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	CAC2	Q04199	468 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	SEC13	Q04491	297 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	SNT309	Q06091	175 aa	Predicted RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	RGC1	Q06108	1083 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	ALE1	Q08548	619 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YPQ1	Q12010	308 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	APC9	Q12107	265 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	BBP1	Q12365	385 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	DCN1	Q12395	269 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	MDS3	P53094	1487 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	ADE5,7	P07244	802 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	DST1	P07273	309 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	NMT1	P14743	455 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YCR102C	P25608	368 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	GDA1	P32621	518 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	SWD2	P36104	329 aa	Predicted RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	ECM13	P38195	257 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	MED8	P38304	223 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YBP1	P38315	674 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	RCK2	P38623	610 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	RRP3	P38712	501 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	GOS1	P38736	223 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YHI9	P38765	294 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	FMP52	P40008	231 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YAT2	P40017	923 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	YER079W	P40052	210 aa	Known RBP	3.75	□□□□□ -1.81
UBP6	YFR010W	YFH7	P43591	353 aa		3.75	□□□□□ -1.81
UBP6	YFR010W	IBD2	P53892	351 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms