RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W RPL21AQ02753 160 aaKnown RBP2.46□□□□□ -2.02
SLD5YDR489W RVB1Q03940 463 aaKnown RBP2.46□□□□□ -2.02
SLD5YDR489W CUR1Q06469 252 aa2.46□□□□□ -2.02
SLD5YDR489W YLR012CQ07927 99 aa2.46□□□□□ -2.02
SLD5YDR489W RPL21BQ12672 160 aaKnown RBP2.46□□□□□ -2.02
SLD5YDR489W YBL111CQ3E7Y5 667 aa2.46□□□□□ -2.02
SLD5YDR489W RPL18AP0CX49 186 aaKnown RBP2.45□□□□□ -2.02
SLD5YDR489W RPL18BP0CX50 186 aaKnown RBP2.45□□□□□ -2.02
SLD5YDR489W BUD2P33314 1104 aa2.45□□□□□ -2.02
SLD5YDR489W MID2P36027 376 aa2.45□□□□□ -2.02
SLD5YDR489W YBR241CP38142 488 aa2.45□□□□□ -2.02
SLD5YDR489W SWC5P38326 303 aa2.45□□□□□ -2.02
SLD5YDR489W RCK1P38622 512 aa2.45□□□□□ -2.02
SLD5YDR489W RIB4P50861 169 aaPredicted RBP2.45□□□□□ -2.02
SLD5YDR489W MKC7P53379 596 aa2.45□□□□□ -2.02
SLD5YDR489W DBP6P53734 629 aaKnown RBP2.45□□□□□ -2.02
SLD5YDR489W MRX11Q03079 207 aa2.45□□□□□ -2.02
SLD5YDR489W VHS1Q03785 461 aa2.45□□□□□ -2.02
SLD5YDR489W CAB5Q03941 241 aa2.45□□□□□ -2.02
SLD5YDR489W RDL2Q08742 149 aaKnown RBP2.45□□□□□ -2.02
SLD5YDR489W SRO7Q12038 1033 aa2.45□□□□□ -2.02
SLD5YDR489W LDB17Q12342 491 aa2.45□□□□□ -2.02
SLD5YDR489W PAA1Q12447 191 aaKnown RBP2.45□□□□□ -2.02
SLD5YDR489W YDL012CQ12489 107 aa2.45□□□□□ -2.02
SLD5YDR489W GCD2P12754 651 aaPredicted RBP2.44□□□□□ -2.02
SLD5YDR489W RBK1P25332 333 aa2.44□□□□□ -2.02
SLD5YDR489W ACB1P31787 87 aa2.44□□□□□ -2.02
SLD5YDR489W DTR1P38125 572 aa2.44□□□□□ -2.02
SLD5YDR489W RRF1P38771 230 aa2.44□□□□□ -2.02
SLD5YDR489W UTP25P40498 721 aaKnown RBP2.44□□□□□ -2.02
SLD5YDR489W STB1P42845 420 aa2.44□□□□□ -2.02
SLD5YDR489W OKP1P53298 406 aa2.44□□□□□ -2.02
SLD5YDR489W KTR6P54070 446 aa2.44□□□□□ -2.02
SLD5YDR489W UBX2Q04228 584 aa2.44□□□□□ -2.02
SLD5YDR489W MMT2Q08970 484 aa2.44□□□□□ -2.02
SLD5YDR489W TIR4Q12218 487 aaPredicted RBP2.44□□□□□ -2.02
SLD5YDR489W RAX2Q12465 1220 aa2.44□□□□□ -2.02
SLD5YDR489W URA10P30402 227 aa2.43□□□□□ -2.02
SLD5YDR489W VMA5P31412 392 aaKnown RBP2.43□□□□□ -2.02
SLD5YDR489W EFM1P38732 585 aa2.43□□□□□ -2.02
SLD5YDR489W GGC1P38988 300 aa2.43□□□□□ -2.02
SLD5YDR489W MNN9P39107 395 aaKnown RBP2.43□□□□□ -2.02
SLD5YDR489W FHL1P39521 936 aa2.43□□□□□ -2.02
SLD5YDR489W RRT13P40042 185 aa2.43□□□□□ -2.02
SLD5YDR489W RRG9P40156 214 aa2.43□□□□□ -2.02
SLD5YDR489W YFR018CP43599 363 aa2.43□□□□□ -2.02
SLD5YDR489W YGR168CP53293 376 aa2.43□□□□□ -2.02
SLD5YDR489W API2Q04413 109 aa2.43□□□□□ -2.02
SLD5YDR489W YLR297WQ05899 129 aa2.43□□□□□ -2.02
SLD5YDR489W BUR2Q05949 395 aa2.43□□□□□ -2.02
SLD5YDR489W MDY2Q12285 212 aa2.43□□□□□ -2.02
SLD5YDR489W PRM4Q12498 284 aa2.43□□□□□ -2.02
SLD5YDR489W STF1P01098 86 aa2.42□□□□□ -2.02
SLD5YDR489W ASP3-2P0CX77 362 aa2.42□□□□□ -2.02
SLD5YDR489W ASP3-3P0CX78 362 aa2.42□□□□□ -2.02
SLD5YDR489W ASP3-4P0CX79 362 aa2.42□□□□□ -2.02
SLD5YDR489W ASP3-1P0CZ17 362 aa2.42□□□□□ -2.02
SLD5YDR489W PUT4P15380 627 aa2.42□□□□□ -2.02
SLD5YDR489W BGL2P15703 313 aaKnown RBP2.42□□□□□ -2.02
SLD5YDR489W DBP3P20447 523 aaKnown RBP2.42□□□□□ -2.02
SLD5YDR489W EPT1P22140 391 aa2.42□□□□□ -2.02
SLD5YDR489W SPS19P32573 292 aaKnown RBP2.42□□□□□ -2.02
SLD5YDR489W CYM1P32898 989 aa2.42□□□□□ -2.02
SLD5YDR489W CBF5P33322 483 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SLD5YDR489W FET3P38993 636 aa2.42□□□□□ -2.02
SLD5YDR489W YGR067CP53243 804 aa2.42□□□□□ -2.02
SLD5YDR489W ECM18Q04623 453 aa2.42□□□□□ -2.02
SLD5YDR489W RRG8Q06109 277 aa2.42□□□□□ -2.02
SLD5YDR489W VAC14Q06708 880 aa2.42□□□□□ -2.02
SLD5YDR489W MRX9Q07349 420 aaKnown RBP2.42□□□□□ -2.02
SLD5YDR489W MIM1Q08176 113 aa2.42□□□□□ -2.02
SLD5YDR489W FAB1P34756 2278 aa2.42□□□□□ -2.02
SLD5YDR489W SPS100P13130 326 aa2.41□□□□□ -2.02
SLD5YDR489W YKL187CP34231 750 aa2.41□□□□□ -2.02
SLD5YDR489W YKL071WP36086 256 aa2.41□□□□□ -2.02
SLD5YDR489W DBP7P36120 742 aaKnown RBP2.41□□□□□ -2.02
SLD5YDR489W END3P39013 349 aa2.41□□□□□ -2.02
SLD5YDR489W LOH1P47055 219 aa2.41□□□□□ -2.02
SLD5YDR489W SDS23P53172 527 aa2.41□□□□□ -2.02
SLD5YDR489W BIO4P53630 237 aa2.41□□□□□ -2.02
SLD5YDR489W HCH1P53834 153 aa2.41□□□□□ -2.02
SLD5YDR489W RNY1Q02933 434 aaKnown RBP2.41□□□□□ -2.02
SLD5YDR489W MCH1Q07376 486 aa2.41□□□□□ -2.02
SLD5YDR489W YPQ1Q12010 308 aa2.41□□□□□ -2.02
SLD5YDR489W APC2Q12440 853 aa2.41□□□□□ -2.02
SLD5YDR489W YAL067W-AQ8TGK6 75 aa2.41□□□□□ -2.02
SLD5YDR489W CAR2P07991 424 aaKnown RBP2.4□□□□□ -2.03
SLD5YDR489W CTA1P15202 515 aa2.4□□□□□ -2.03
SLD5YDR489W MEI5P32489 222 aa2.4□□□□□ -2.03
SLD5YDR489W YHR035WP38769 630 aa2.4□□□□□ -2.03
SLD5YDR489W GCD14P46959 383 aaPredicted RBP2.4□□□□□ -2.03
SLD5YDR489W VEL1P53058 206 aa2.4□□□□□ -2.03
SLD5YDR489W DTD1Q07648 150 aaKnown RBP2.4□□□□□ -2.03
SLD5YDR489W MHP1P43638 1398 aa2.39□□□□□ -2.03
SLD5YDR489W RPS19AP07280 144 aaKnown RBP2.39□□□□□ -2.03
SLD5YDR489W RPS19BP07281 144 aaPredicted RBP2.39□□□□□ -2.03
SLD5YDR489W RPL5P26321 297 aaKnown RBP2.39□□□□□ -2.03
SLD5YDR489W ITR2P30606 609 aa2.39□□□□□ -2.03
SLD5YDR489W KTI12P34253 313 aaKnown RBP2.39□□□□□ -2.03
SLD5YDR489W TAE1P38340 232 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms