RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A VTI1Q04338 217 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A TAF10Q12030 206 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A YDR018CQ12185 396 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A IML3P38265 245 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A YMR262WP38430 313 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A HCH1P53834 153 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A GMC1Q04399 608 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A RPN6Q12377 434 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A SFG1Q12507 346 aa2.42□□□□□ -2.02
YDR261W-AYDR261W-A MHP1P43638 1398 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A YPR096CO13587 100 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A YLL053CP0CD98 152 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A CPT1P17898 393 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A UTR1P21373 530 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A ERG9P29704 444 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A SRB2P34162 210 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A ADH5P38113 351 aaKnown RBP2.41□□□□□ -2.02
YDR261W-AYDR261W-A YCH1P42937 148 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A ASG7P46993 209 aa2.41□□□□□ -2.02
YDR261W-AYDR261W-A RAD1P06777 1100 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A STE3P06783 470 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A CUP2P15315 225 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A YIL054WP40524 105 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A YNL143CP53908 130 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A YMR244WQ04018 355 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A NBL1Q3E7Y6 73 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A RGS2Q99188 309 aa2.4□□□□□ -2.03
YDR261W-AYDR261W-A CTA1P15202 515 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A SAG1P20840 650 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A HXT2P23585 541 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A ITR2P30606 609 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A ZRT3P34240 503 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A KTI12P34253 313 aaKnown RBP2.39□□□□□ -2.03
YDR261W-AYDR261W-A YHR122WP38829 231 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A SPO73P40031 143 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A YMR134WP40207 237 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A FMP48P53233 369 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A AQR1P53943 586 aa2.39□□□□□ -2.03
YDR261W-AYDR261W-A SMD1Q02260 146 aaPredicted RBP2.39□□□□□ -2.03
YDR261W-AYDR261W-A CIN8P27895 1000 aa2.38□□□□□ -2.03
YDR261W-AYDR261W-A CBF5P33322 483 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YDR261W-AYDR261W-A MYO3P36006 1272 aa2.38□□□□□ -2.03
YDR261W-AYDR261W-A LAS1P36146 502 aaPredicted RBP2.38□□□□□ -2.03
YDR261W-AYDR261W-A RFT1P38206 574 aaPredicted RBP2.38□□□□□ -2.03
YDR261W-AYDR261W-A MMS21P38632 267 aa2.38□□□□□ -2.03
YDR261W-AYDR261W-A MIC19P43594 170 aa2.38□□□□□ -2.03
YDR261W-AYDR261W-A DCC1P25559 380 aa2.37□□□□□ -2.03
YDR261W-AYDR261W-A PEX32P38292 413 aa2.37□□□□□ -2.03
YDR261W-AYDR261W-A ALP1P38971 573 aa2.37□□□□□ -2.03
YDR261W-AYDR261W-A CAX4P53223 239 aa2.37□□□□□ -2.03
YDR261W-AYDR261W-A ECM19Q06011 112 aa2.37□□□□□ -2.03
YDR261W-AYDR261W-A SPH1Q06160 661 aa2.37□□□□□ -2.03
YDR261W-AYDR261W-A DBP9Q06218 594 aaKnown RBP2.37□□□□□ -2.03
YDR261W-AYDR261W-A DFM1Q12743 341 aaKnown RBP2.37□□□□□ -2.03
YDR261W-AYDR261W-A PRP39P39682 629 aaKnown RBP2.36□□□□□ -2.03
YDR261W-AYDR261W-A RRG9P40156 214 aa2.36□□□□□ -2.03
YDR261W-AYDR261W-A YJL144WP47009 104 aa2.36□□□□□ -2.03
YDR261W-AYDR261W-A YNL146WP53906 100 aa2.36□□□□□ -2.03
YDR261W-AYDR261W-A RBK1P25332 333 aa2.35□□□□□ -2.03
YDR261W-AYDR261W-A SMF2P38778 549 aa2.35□□□□□ -2.03
YDR261W-AYDR261W-A YGL118CP53132 145 aa2.35□□□□□ -2.03
YDR261W-AYDR261W-A CUE3P53137 624 aaKnown RBP2.35□□□□□ -2.03
YDR261W-AYDR261W-A TPC1P53257 314 aa2.35□□□□□ -2.03
YDR261W-AYDR261W-A HRT1Q08273 121 aa2.35□□□□□ -2.03
YDR261W-AYDR261W-A NFI1Q12216 726 aa2.35□□□□□ -2.03
YDR261W-AYDR261W-A PRP46Q12417 451 aaPredicted RBP2.35□□□□□ -2.03
YDR261W-AYDR261W-A RPS23AP0CX29 145 aaKnown RBP2.34□□□□□ -2.04
YDR261W-AYDR261W-A RPS23BP0CX30 145 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A RPB9P27999 122 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A MEI5P32489 222 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A YKL187CP34231 750 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A RCK1P38622 512 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A BTT1P40314 149 aaPredicted RBP2.34□□□□□ -2.04
YDR261W-AYDR261W-A YGL114WP53134 725 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A SDS23P53172 527 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A DIB1Q06819 143 aaPredicted RBP2.34□□□□□ -2.04
YDR261W-AYDR261W-A DTD1Q07648 150 aaKnown RBP2.34□□□□□ -2.04
YDR261W-AYDR261W-A SPO24Q3E752 67 aa2.34□□□□□ -2.04
YDR261W-AYDR261W-A REP1P03871 373 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A SPS100P13130 326 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A TAL1P15019 335 aaKnown RBP2.33□□□□□ -2.04
YDR261W-AYDR261W-A DAL5P15365 543 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A HPR1P17629 752 aaKnown RBP2.33□□□□□ -2.04
YDR261W-AYDR261W-A CTM1P38818 585 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A ECM14P38836 430 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A DSE1P40077 573 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A SLM1P40485 686 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A PMT4P46971 762 aa2.33□□□□□ -2.04
YDR261W-AYDR261W-A PXR1P53335 271 aaPredicted RBP2.33□□□□□ -2.04
YDR261W-AYDR261W-A MRX9Q07349 420 aaKnown RBP2.33□□□□□ -2.04
YDR261W-AYDR261W-A MRPL20P22354 195 aaPredicted RBP2.32□□□□□ -2.04
YDR261W-AYDR261W-A INO2P26798 304 aa2.32□□□□□ -2.04
YDR261W-AYDR261W-A VMA5P31412 392 aaKnown RBP2.32□□□□□ -2.04
YDR261W-AYDR261W-A YIL089WP40500 205 aa2.32□□□□□ -2.04
YDR261W-AYDR261W-A TAF6P53040 516 aa2.32□□□□□ -2.04
YDR261W-AYDR261W-A SAL1D6W196 494 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A PPQ1P32945 549 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A TKL2P33315 681 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A SIF2P38262 535 aa2.31□□□□□ -2.04
YDR261W-AYDR261W-A BUD13P46947 266 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms