RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM4	YDR257C	MKC7	P53379	596 aa		4.17	□□□□□ -1.74
RKM4	YDR257C	PAA1	Q12447	191 aa	Known RBP	4.17	□□□□□ -1.74
RKM4	YDR257C	ASP3-2	P0CX77	362 aa		4.16	□□□□□ -1.74
RKM4	YDR257C	ASP3-3	P0CX78	362 aa		4.16	□□□□□ -1.74
RKM4	YDR257C	ASP3-4	P0CX79	362 aa		4.16	□□□□□ -1.74
RKM4	YDR257C	ASP3-1	P0CZ17	362 aa		4.16	□□□□□ -1.74
RKM4	YDR257C	YKL071W	P36086	256 aa		4.16	□□□□□ -1.74
RKM4	YDR257C	MRPL40	P36534	297 aa		4.16	□□□□□ -1.74
RKM4	YDR257C	FHL1	P39521	936 aa		4.16	□□□□□ -1.74
RKM4	YDR257C	PFK27	Q12471	397 aa	Predicted RBP	4.16	□□□□□ -1.74
RKM4	YDR257C	DCP1	Q12517	231 aa	Predicted RBP	4.16	□□□□□ -1.74
RKM4	YDR257C	CTA1	P15202	515 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	SHE3	P38272	425 aa	Known RBP	4.15	□□□□□ -1.75
RKM4	YDR257C	SMF2	P38778	549 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	FET3	P38993	636 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	STB1	P42845	420 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	YGL262W	P53054	175 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	RRG8	Q06109	277 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	VAC14	Q06708	880 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	YOR376W	Q08900	122 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	TAF10	Q12030	206 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	SRO7	Q12038	1033 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	YIL002W-A	Q3E7Z5	69 aa		4.15	□□□□□ -1.75
RKM4	YDR257C	CAR2	P07991	424 aa	Known RBP	4.14	□□□□□ -1.75
RKM4	YDR257C	YKL162C	P36052	402 aa		4.14	□□□□□ -1.75
RKM4	YDR257C	CDC40	P40968	455 aa	Predicted RBP	4.14	□□□□□ -1.75
RKM4	YDR257C	TPS1	Q00764	495 aa	Known RBP	4.14	□□□□□ -1.75
RKM4	YDR257C	UBX2	Q04228	584 aa		4.14	□□□□□ -1.75
RKM4	YDR257C	RPN8	Q08723	338 aa	Known RBP	4.14	□□□□□ -1.75
RKM4	YDR257C	SAM4	Q08985	325 aa	Known RBP	4.14	□□□□□ -1.75
RKM4	YDR257C	REP1	P03871	373 aa		4.13	□□□□□ -1.75
RKM4	YDR257C	KTI12	P34253	313 aa	Known RBP	4.13	□□□□□ -1.75
RKM4	YDR257C	MRPL27	P36526	146 aa	Predicted RBP	4.13	□□□□□ -1.75
RKM4	YDR257C	PGU1	P47180	361 aa		4.13	□□□□□ -1.75
RKM4	YDR257C	MCH1	Q07376	486 aa		4.13	□□□□□ -1.75
RKM4	YDR257C	CBP6	P07253	162 aa	Predicted RBP	4.12	□□□□□ -1.75
RKM4	YDR257C	DBP3	P20447	523 aa	Known RBP	4.12	□□□□□ -1.75
RKM4	YDR257C	ERV25	P54837	211 aa	Known RBP	4.12	□□□□□ -1.75
RKM4	YDR257C	RMI1	Q02685	241 aa		4.12	□□□□□ -1.75
RKM4	YDR257C	IRC4	Q03036	179 aa		4.12	□□□□□ -1.75
RKM4	YDR257C	MRX11	Q03079	207 aa		4.12	□□□□□ -1.75
RKM4	YDR257C	SCS7	Q03529	384 aa		4.12	□□□□□ -1.75
RKM4	YDR257C	FAR10	Q06001	478 aa		4.12	□□□□□ -1.75
RKM4	YDR257C	RDL2	Q08742	149 aa	Known RBP	4.12	□□□□□ -1.75
RKM4	YDR257C	SAL1	D6W196	494 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	BGL2	P15703	313 aa	Known RBP	4.11	□□□□□ -1.75
RKM4	YDR257C	RPL5	P26321	297 aa	Known RBP	4.11	□□□□□ -1.75
RKM4	YDR257C	PDC2	P32896	925 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	ECT1	P33412	323 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	DTR1	P38125	572 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	MRP21	P38175	177 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	CHL4	P38907	458 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	GPI8	P49018	411 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	OKP1	P53298	406 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	RPL21A	Q02753	160 aa	Known RBP	4.11	□□□□□ -1.75
RKM4	YDR257C	YPL080C	Q02826	108 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	DTD1	Q07648	150 aa	Known RBP	4.11	□□□□□ -1.75
RKM4	YDR257C	YLR012C	Q07927	99 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	PRM4	Q12498	284 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	EBP2	P36049	427 aa	Known RBP	4.11	□□□□□ -1.75
RKM4	YDR257C	EFM1	P38732	585 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	YHR035W	P38769	630 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	PMT4	P46971	762 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	NRM1	P53718	249 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	EGD1	Q02642	157 aa	Known RBP	4.11	□□□□□ -1.75
RKM4	YDR257C	SPO19	Q03029	223 aa		4.11	□□□□□ -1.75
RKM4	YDR257C	MRX9	Q07349	420 aa	Known RBP	4.11	□□□□□ -1.75
RKM4	YDR257C	MHP1	P43638	1398 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	SOD1	P00445	154 aa	Known RBP	4.1	□□□□□ -1.75
RKM4	YDR257C	PUT4	P15380	627 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	RAD23	P32628	398 aa	Known RBP	4.1	□□□□□ -1.75
RKM4	YDR257C	ZRT1	P32804	376 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	RPC25	P35718	212 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	VEL1	P53058	206 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	VHS1	Q03785	461 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	APC4	Q04601	652 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	MMT2	Q08970	484 aa		4.1	□□□□□ -1.75
RKM4	YDR257C	RPC40	P07703	335 aa	Known RBP	4.09	□□□□□ -1.75
RKM4	YDR257C	UGA1	P17649	471 aa		4.09	□□□□□ -1.75
RKM4	YDR257C	EPT1	P22140	391 aa		4.09	□□□□□ -1.75
RKM4	YDR257C	SPS19	P32573	292 aa	Known RBP	4.09	□□□□□ -1.75
RKM4	YDR257C	YFL040W	P43562	540 aa		4.09	□□□□□ -1.75
RKM4	YDR257C	COX16	P47081	118 aa		4.09	□□□□□ -1.75
RKM4	YDR257C	PNC1	P53184	216 aa	Known RBP	4.09	□□□□□ -1.75
RKM4	YDR257C	YLR413W	Q06689	675 aa		4.09	□□□□□ -1.75
RKM4	YDR257C	RAD7	P06779	565 aa		4.08	□□□□□ -1.76
RKM4	YDR257C	GAL7	P08431	366 aa		4.08	□□□□□ -1.76
RKM4	YDR257C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RKM4	YDR257C	YMR262W	P38430	313 aa		4.08	□□□□□ -1.76
RKM4	YDR257C	GGC1	P38988	300 aa		4.08	□□□□□ -1.76
RKM4	YDR257C	DSE1	P40077	573 aa		4.08	□□□□□ -1.76
RKM4	YDR257C	YMR111C	Q04461	462 aa	Predicted RBP	4.08	□□□□□ -1.76
RKM4	YDR257C	ECM18	Q04623	453 aa		4.08	□□□□□ -1.76
RKM4	YDR257C	PBP4	Q07362	185 aa	Known RBP	4.08	□□□□□ -1.76
RKM4	YDR257C	SIA1	Q12212	622 aa		4.08	□□□□□ -1.76
RKM4	YDR257C	STE2	D6VTK4	431 aa		4.07	□□□□□ -1.76
RKM4	YDR257C	ADH1	P00330	348 aa	Known RBP	4.07	□□□□□ -1.76
RKM4	YDR257C	SPS100	P13130	326 aa		4.07	□□□□□ -1.76
RKM4	YDR257C	MID2	P36027	376 aa		4.07	□□□□□ -1.76
RKM4	YDR257C	MRPS9	P38120	278 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms