RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C RPB9P27999 122 aa1.8□□□□□ -2.12
SNU56YDR240C MED8P38304 223 aa1.8□□□□□ -2.12
SNU56YDR240C ATG7P38862 630 aa1.8□□□□□ -2.12
SNU56YDR240C ASG7P46993 209 aa1.8□□□□□ -2.12
SNU56YDR240C SHE4P51534 789 aa1.8□□□□□ -2.12
SNU56YDR240C YGL088WP53151 121 aa1.8□□□□□ -2.12
SNU56YDR240C YPL113CQ02961 396 aa1.8□□□□□ -2.12
SNU56YDR240C CSM3Q04659 317 aa1.8□□□□□ -2.12
SNU56YDR240C SPH1Q06160 661 aa1.8□□□□□ -2.12
SNU56YDR240C TAF10Q12030 206 aa1.8□□□□□ -2.12
SNU56YDR240C MKK1P32490 508 aa1.79□□□□□ -2.12
SNU56YDR240C MRPS5P33759 307 aa1.79□□□□□ -2.12
SNU56YDR240C YKL187CP34231 750 aa1.79□□□□□ -2.12
SNU56YDR240C ZRT3P34240 503 aa1.79□□□□□ -2.12
SNU56YDR240C RFT1P38206 574 aaPredicted RBP1.79□□□□□ -2.12
SNU56YDR240C GDI1P39958 451 aaKnown RBP1.79□□□□□ -2.12
SNU56YDR240C ARR1Q06596 294 aa1.79□□□□□ -2.12
SNU56YDR240C RLP24Q07915 199 aaKnown RBP1.79□□□□□ -2.12
SNU56YDR240C THR4P16120 514 aaKnown RBP1.78□□□□□ -2.12
SNU56YDR240C CKI1P20485 582 aa1.78□□□□□ -2.12
SNU56YDR240C MNE1P24720 663 aa1.78□□□□□ -2.12
SNU56YDR240C MIG1P27705 504 aa1.78□□□□□ -2.12
SNU56YDR240C PUP2P32379 260 aa1.78□□□□□ -2.12
SNU56YDR240C YGP1P38616 354 aaKnown RBP1.78□□□□□ -2.12
SNU56YDR240C YMR244WQ04018 355 aa1.78□□□□□ -2.12
SNU56YDR240C SMP3Q04174 516 aa1.78□□□□□ -2.12
SNU56YDR240C GTO3Q04806 366 aa1.78□□□□□ -2.12
SNU56YDR240C YDR222WQ04925 415 aa1.78□□□□□ -2.12
SNU56YDR240C YPL264CQ08980 353 aa1.78□□□□□ -2.12
SNU56YDR240C RPN6Q12377 434 aa1.78□□□□□ -2.12
SNU56YDR240C TFB5Q3E7C1 72 aaPredicted RBP1.78□□□□□ -2.12
SNU56YDR240C CTA1P15202 515 aa1.77□□□□□ -2.13
SNU56YDR240C DAL81P21657 970 aa1.77□□□□□ -2.13
SNU56YDR240C FAA1P30624 700 aaKnown RBP1.77□□□□□ -2.13
SNU56YDR240C HMX1P32339 317 aa1.77□□□□□ -2.13
SNU56YDR240C SMF2P38778 549 aa1.77□□□□□ -2.13
SNU56YDR240C SMC2P38989 1170 aaKnown RBP1.77□□□□□ -2.13
SNU56YDR240C SLM1P40485 686 aa1.77□□□□□ -2.13
SNU56YDR240C CAX4P53223 239 aa1.77□□□□□ -2.13
SNU56YDR240C YNR068CP53754 272 aa1.77□□□□□ -2.13
SNU56YDR240C YDR114CQ04597 100 aa1.77□□□□□ -2.13
SNU56YDR240C NAT4Q04751 285 aa1.77□□□□□ -2.13
SNU56YDR240C APC5Q08683 685 aa1.77□□□□□ -2.13
SNU56YDR240C MHP1P43638 1398 aa1.77□□□□□ -2.13
SNU56YDR240C MAS1P10507 462 aa1.76□□□□□ -2.13
SNU56YDR240C PHO84P25297 587 aaKnown RBP1.76□□□□□ -2.13
SNU56YDR240C ATG12P38316 186 aa1.76□□□□□ -2.13
SNU56YDR240C YMR134WP40207 237 aa1.76□□□□□ -2.13
SNU56YDR240C YCH1P42937 148 aa1.76□□□□□ -2.13
SNU56YDR240C YHC3P47040 408 aa1.76□□□□□ -2.13
SNU56YDR240C SDS23P53172 527 aa1.76□□□□□ -2.13
SNU56YDR240C FMP48P53233 369 aa1.76□□□□□ -2.13
SNU56YDR240C UBA1P22515 1024 aaKnown RBP1.75□□□□□ -2.13
SNU56YDR240C MXR2P25566 168 aa1.75□□□□□ -2.13
SNU56YDR240C ARO4P32449 370 aaKnown RBP1.75□□□□□ -2.13
SNU56YDR240C CSE1P33307 960 aa1.75□□□□□ -2.13
SNU56YDR240C PEX32P38292 413 aa1.75□□□□□ -2.13
SNU56YDR240C YHR122WP38829 231 aa1.75□□□□□ -2.13
SNU56YDR240C SEC28P40509 296 aaKnown RBP1.75□□□□□ -2.13
SNU56YDR240C YFR045WP43617 309 aa1.75□□□□□ -2.13
SNU56YDR240C YGL118CP53132 145 aa1.75□□□□□ -2.13
SNU56YDR240C YMR310CQ04867 317 aaPredicted RBP1.75□□□□□ -2.13
SNU56YDR240C GLE1Q12315 538 aa1.75□□□□□ -2.13
SNU56YDR240C TRM10Q12400 293 aa1.75□□□□□ -2.13
SNU56YDR240C TDH2P00358 332 aaKnown RBP1.75□□□□□ -2.13
SNU56YDR240C TDH3P00359 332 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
SNU56YDR240C HSP82P02829 709 aaKnown RBP1.75□□□□□ -2.13
SNU56YDR240C MET2P08465 486 aa1.75□□□□□ -2.13
SNU56YDR240C DAP2P18962 818 aa1.75□□□□□ -2.13
SNU56YDR240C DCC1P25559 380 aa1.75□□□□□ -2.13
SNU56YDR240C RDS1P25611 832 aa1.75□□□□□ -2.13
SNU56YDR240C MPE1P35728 441 aaKnown RBP1.75□□□□□ -2.13
SNU56YDR240C YKR032WP36127 104 aa1.75□□□□□ -2.13
SNU56YDR240C CTM1P38818 585 aa1.75□□□□□ -2.13
SNU56YDR240C ASP1P38986 381 aaPredicted RBP1.75□□□□□ -2.13
SNU56YDR240C TPC1P53257 314 aa1.75□□□□□ -2.13
SNU56YDR240C DTD1Q07648 150 aaKnown RBP1.75□□□□□ -2.13
SNU56YDR240C SFG1Q12507 346 aa1.75□□□□□ -2.13
SNU56YDR240C RAD1P06777 1100 aa1.74□□□□□ -2.13
SNU56YDR240C UTR1P21373 530 aa1.74□□□□□ -2.13
SNU56YDR240C RSA4P25382 515 aaKnown RBP1.74□□□□□ -2.13
SNU56YDR240C KTI12P34253 313 aaKnown RBP1.74□□□□□ -2.13
SNU56YDR240C YSW1P38280 609 aa1.74□□□□□ -2.13
SNU56YDR240C MMS21P38632 267 aa1.74□□□□□ -2.13
SNU56YDR240C PMT4P46971 762 aa1.74□□□□□ -2.13
SNU56YDR240C DXO1Q06349 442 aa1.74□□□□□ -2.13
SNU56YDR240C TFC7Q12415 435 aa1.74□□□□□ -2.13
SNU56YDR240C PRM4Q12498 284 aa1.74□□□□□ -2.13
SNU56YDR240C BUD2P33314 1104 aa1.73□□□□□ -2.13
SNU56YDR240C DSE1P40077 573 aa1.73□□□□□ -2.13
SNU56YDR240C RPA34P47006 233 aaPredicted RBP1.73□□□□□ -2.13
SNU56YDR240C HCH1P53834 153 aa1.73□□□□□ -2.13
SNU56YDR240C UTP6Q02354 440 aaKnown RBP1.73□□□□□ -2.13
SNU56YDR240C MIX17Q03667 156 aa1.73□□□□□ -2.13
SNU56YDR240C PEX30Q06169 523 aa1.73□□□□□ -2.13
SNU56YDR240C MRX9Q07349 420 aaKnown RBP1.73□□□□□ -2.13
SNU56YDR240C CLP1Q08685 445 aaPredicted RBP1.73□□□□□ -2.13
SNU56YDR240C SKS1Q12505 502 aa1.73□□□□□ -2.13
SNU56YDR240C DAD2P36162 133 aa1.72□□□□□ -2.13
SNU56YDR240C ECO1P43605 281 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms