RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeastyeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC1YDR182W IRC19Q07843 230 aa5.69□□□□□ -1.5
CDC1YDR182W CRT10Q08226 957 aa5.69□□□□□ -1.5
CDC1YDR182W SKI7Q08491 747 aaPredicted RBP5.69□□□□□ -1.5
CDC1YDR182W MED2Q12124 431 aa5.69□□□□□ -1.5
CDC1YDR182W SFM1Q12314 213 aa5.69□□□□□ -1.5
CDC1YDR182W BPH1P25356 2167 aa5.69□□□□□ -1.5
CDC1YDR182W GPM1P00950 247 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W RHO1P06780 209 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W PET9P18239 318 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W YPK2P18961 677 aa5.68□□□□□ -1.5
CDC1YDR182W RPB8P20436 146 aa5.68□□□□□ -1.5
CDC1YDR182W HBS1P32769 611 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W TIM12P32830 109 aa5.68□□□□□ -1.5
CDC1YDR182W ARC19P33204 171 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W NUF2P33895 451 aa5.68□□□□□ -1.5
CDC1YDR182W RSM22P36056 628 aa5.68□□□□□ -1.5
CDC1YDR182W SKN7P38889 622 aa5.68□□□□□ -1.5
CDC1YDR182W RSP5P39940 809 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W COG3P40094 801 aa5.68□□□□□ -1.5
CDC1YDR182W GCN20P43535 752 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W PCP1P53259 346 aa5.68□□□□□ -1.5
CDC1YDR182W RBG2P53295 368 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W UGO1Q03327 502 aa5.68□□□□□ -1.5
CDC1YDR182W VBA4Q04602 768 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W RNH202Q05635 350 aa5.68□□□□□ -1.5
CDC1YDR182W SWA2Q06677 668 aa5.68□□□□□ -1.5
CDC1YDR182W TMC1Q08422 150 aaPredicted RBP5.68□□□□□ -1.5
CDC1YDR182W SNX3Q08826 162 aaKnown RBP5.68□□□□□ -1.5
CDC1YDR182W CAR2P07991 424 aaKnown RBP5.67□□□□□ -1.5
CDC1YDR182W MSS18P08593 268 aa5.67□□□□□ -1.5
CDC1YDR182W RNA1P11745 407 aaKnown RBP5.67□□□□□ -1.5
CDC1YDR182W YCR100CP25606 316 aa5.67□□□□□ -1.5
CDC1YDR182W ARP2P32381 391 aaKnown RBP5.67□□□□□ -1.5
CDC1YDR182W SOF1P33750 489 aaKnown RBP5.67□□□□□ -1.5
CDC1YDR182W YKL187CP34231 750 aa5.67□□□□□ -1.5
CDC1YDR182W YHL012WP38709 493 aa5.67□□□□□ -1.5
CDC1YDR182W KRE29P40026 464 aa5.67□□□□□ -1.5
CDC1YDR182W AVT7P40501 490 aa5.67□□□□□ -1.5
CDC1YDR182W IRC7P43623 340 aa5.67□□□□□ -1.5
CDC1YDR182W GET1P53192 235 aa5.67□□□□□ -1.5
CDC1YDR182W DAM1P53267 343 aa5.67□□□□□ -1.5
CDC1YDR182W BCP1Q06338 283 aa5.67□□□□□ -1.5
CDC1YDR182W GRE1Q08969 168 aa5.67□□□□□ -1.5
CDC1YDR182W RLM1Q12224 676 aa5.67□□□□□ -1.5
CDC1YDR182W PFK27Q12471 397 aaPredicted RBP5.67□□□□□ -1.5
CDC1YDR182W YOR343CQ12484 108 aa5.67□□□□□ -1.5
CDC1YDR182W SET6Q12529 373 aa5.67□□□□□ -1.5
CDC1YDR182W MHF2Q3E829 80 aa5.67□□□□□ -1.5
CDC1YDR182W DET1Q99288 334 aaKnown RBP5.67□□□□□ -1.5
CDC1YDR182W Q0297Q9ZZV8 51 aa5.67□□□□□ -1.5
CDC1YDR182W ATP2P00830 511 aaKnown RBP5.66□□□□□ -1.5
CDC1YDR182W SIR3P06701 978 aa5.66□□□□□ -1.5
CDC1YDR182W YOL163WP0CF20 169 aa5.66□□□□□ -1.5
CDC1YDR182W RHB1P25378 209 aa5.66□□□□□ -1.5
CDC1YDR182W ITR2P30606 609 aa5.66□□□□□ -1.5
CDC1YDR182W NTG1P31378 399 aa5.66□□□□□ -1.5
CDC1YDR182W SLC1P33333 303 aa5.66□□□□□ -1.5
CDC1YDR182W MAE1P36013 669 aaKnown RBP5.66□□□□□ -1.5
CDC1YDR182W GDT1P38301 280 aaPredicted RBP5.66□□□□□ -1.5
CDC1YDR182W PRS3P38689 320 aaKnown RBP5.66□□□□□ -1.5
CDC1YDR182W MAM33P40513 266 aa5.66□□□□□ -1.5
CDC1YDR182W TMA22P47089 198 aaPredicted RBP5.66□□□□□ -1.5
CDC1YDR182W MIG2P53035 382 aa5.66□□□□□ -1.5
CDC1YDR182W BRR6P53062 197 aa5.66□□□□□ -1.5
CDC1YDR182W YNR062CP53748 327 aa5.66□□□□□ -1.5
CDC1YDR182W ELA1P53861 379 aaPredicted RBP5.66□□□□□ -1.5
CDC1YDR182W YKR011CQ02209 353 aa5.66□□□□□ -1.5
CDC1YDR182W SVL3Q03088 825 aaKnown RBP5.66□□□□□ -1.5
CDC1YDR182W SCS7Q03529 384 aa5.66□□□□□ -1.5
CDC1YDR182W GTB1Q04924 702 aa5.66□□□□□ -1.5
CDC1YDR182W SYO1Q07395 620 aa5.66□□□□□ -1.5
CDC1YDR182W NTG2Q08214 380 aa5.66□□□□□ -1.5
CDC1YDR182W YPL191CQ08930 360 aa5.66□□□□□ -1.5
CDC1YDR182W ULA1Q12059 462 aa5.66□□□□□ -1.5
CDC1YDR182W DBP10Q12389 995 aaKnown RBP5.66□□□□□ -1.5
CDC1YDR182W MRX4Q12467 430 aa5.66□□□□□ -1.5
CDC1YDR182W MRPS5P33759 307 aa5.65□□□□□ -1.5
CDC1YDR182W RIB1P38066 345 aa5.65□□□□□ -1.5
CDC1YDR182W CHK1P38147 527 aa5.65□□□□□ -1.5
CDC1YDR182W AIM3P38266 947 aaKnown RBP5.65□□□□□ -1.5
CDC1YDR182W NAS2P40555 220 aa5.65□□□□□ -1.5
CDC1YDR182W QRI1P43123 477 aaKnown RBP5.65□□□□□ -1.5
CDC1YDR182W IMD4P50094 524 aaKnown RBP5.65□□□□□ -1.5
CDC1YDR182W PEX12Q04370 399 aa5.65□□□□□ -1.5
CDC1YDR182W MRPL1Q04599 285 aa5.65□□□□□ -1.5
CDC1YDR182W DBP9Q06218 594 aaKnown RBP5.65□□□□□ -1.5
CDC1YDR182W YPR147CQ06522 304 aaKnown RBP5.65□□□□□ -1.5
CDC1YDR182W OSW1Q08692 278 aa5.65□□□□□ -1.5
CDC1YDR182W MRP10O75012 95 aa5.64□□□□□ -1.51
CDC1YDR182W PEP4P07267 405 aaKnown RBP5.64□□□□□ -1.51
CDC1YDR182W CMK2P22517 447 aa5.64□□□□□ -1.51
CDC1YDR182W IDH1P28834 360 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
CDC1YDR182W ITR1P30605 584 aa5.64□□□□□ -1.51
CDC1YDR182W SNC1P31109 117 aa5.64□□□□□ -1.51
CDC1YDR182W HIS7P33734 552 aaKnown RBP5.64□□□□□ -1.51
CDC1YDR182W JEN1P36035 616 aa5.64□□□□□ -1.51
CDC1YDR182W SKG1P36169 355 aa5.64□□□□□ -1.51
CDC1YDR182W YEL068CP39977 110 aa5.64□□□□□ -1.51
CDC1YDR182W MOB2P43563 287 aa5.64□□□□□ -1.51
CDC1YDR182W CAK1P43568 368 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms