RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	SRB2	P34162	210 aa		4.74	□□□□□ -1.65
SIR2	YDL042C	ATG7	P38862	630 aa		4.74	□□□□□ -1.65
SIR2	YDL042C	RBG1	P39729	369 aa		4.74	□□□□□ -1.65
SIR2	YDL042C	YJR030C	P47101	745 aa		4.74	□□□□□ -1.65
SIR2	YDL042C	YNL146W	P53906	100 aa		4.74	□□□□□ -1.65
SIR2	YDL042C	SKI8	Q02793	397 aa	Predicted RBP	4.74	□□□□□ -1.65
SIR2	YDL042C	RPP0	P05317	312 aa	Known RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	ARF2	P19146	181 aa	Known RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	CDC50	P25656	391 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	MRPS5	P33759	307 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	SDS24	P38314	527 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	LSM12	P38828	187 aa	Known RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	LIN1	P38852	340 aa	Predicted RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	PRP39	P39682	629 aa	Known RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	KEG1	P43614	200 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	YGL114W	P53134	725 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	HEM4	P06174	275 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	SPR1	P32603	445 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	YKR015C	P36111	568 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	YPT35	P38815	214 aa	Known RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	YMR134W	P40207	237 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	DFG10	P40526	253 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	SHE10	P53075	577 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	CWC22	P53333	577 aa	Known RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	YLR152C	P54072	576 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	MGR3	Q04472	501 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	DIB1	Q06819	143 aa	Predicted RBP	4.73	□□□□□ -1.65
SIR2	YDL042C	YDL109C	Q12103	647 aa		4.73	□□□□□ -1.65
SIR2	YDL042C	SWI1	P09547	1314 aa		4.72	□□□□□ -1.65
SIR2	YDL042C	MSC3	Q05812	728 aa		4.72	□□□□□ -1.65
SIR2	YDL042C	SPO24	Q3E752	67 aa		4.72	□□□□□ -1.65
SIR2	YDL042C	PMD1	P32634	1753 aa		4.71	□□□□□ -1.65
SIR2	YDL042C	OM14	P38325	134 aa		4.71	□□□□□ -1.66
SIR2	YDL042C	RPL23A	P0CX41	137 aa	Known RBP	4.7	□□□□□ -1.66
SIR2	YDL042C	RPL23B	P0CX42	137 aa	Known RBP	4.7	□□□□□ -1.66
SIR2	YDL042C	UTR1	P21373	530 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	GIT1	P25346	518 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	CIN8	P27895	1000 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	IST2	P38250	946 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	TIS11	P47977	285 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	PRO2	P54885	456 aa	Known RBP	4.7	□□□□□ -1.66
SIR2	YDL042C	RTC5	Q12108	567 aa	Known RBP	4.7	□□□□□ -1.66
SIR2	YDL042C	MCT1	Q12283	360 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	RGS2	Q99188	309 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	RNR2	P09938	399 aa	Known RBP	4.7	□□□□□ -1.66
SIR2	YDL042C	PFS1	P38872	237 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	TIM17	P39515	158 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	UBA3	Q99344	299 aa		4.7	□□□□□ -1.66
SIR2	YDL042C	PRB1	P09232	635 aa		4.69	□□□□□ -1.66
SIR2	YDL042C	GAL3	P13045	520 aa		4.69	□□□□□ -1.66
SIR2	YDL042C	MKK1	P32490	508 aa		4.69	□□□□□ -1.66
SIR2	YDL042C	SUR1	P33300	382 aa		4.69	□□□□□ -1.66
SIR2	YDL042C	YGL039W	P53183	348 aa	Known RBP	4.69	□□□□□ -1.66
SIR2	YDL042C	ICL1	P28240	557 aa	Predicted RBP	4.68	□□□□□ -1.66
SIR2	YDL042C	HEM14	P40012	539 aa		4.68	□□□□□ -1.66
SIR2	YDL042C	OSW5	P40219	148 aa		4.68	□□□□□ -1.66
SIR2	YDL042C	CSM3	Q04659	317 aa		4.68	□□□□□ -1.66
SIR2	YDL042C	SFM1	Q12314	213 aa		4.68	□□□□□ -1.66
SIR2	YDL042C	YDR262W	Q12331	272 aa		4.68	□□□□□ -1.66
SIR2	YDL042C	RAD1	P06777	1100 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	ZRC1	P20107	442 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	PCL1	P24867	279 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	DEP1	P31385	405 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	MYO3	P36006	1272 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	IML3	P38265	245 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	PEX32	P38292	413 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	SHC1	P39000	512 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	PRP38	Q00723	242 aa	Predicted RBP	4.67	□□□□□ -1.66
SIR2	YDL042C	HAL1	Q01766	294 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	FSH2	Q05015	223 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	SAC3	P46674	1301 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	STE7	P06784	515 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	LDS1	P31379	325 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	IES6	P32617	166 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	VAC7	P53950	1165 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	ATP16	Q12165	160 aa		4.67	□□□□□ -1.66
SIR2	YDL042C	MIR1	P23641	311 aa	Known RBP	4.66	□□□□□ -1.66
SIR2	YDL042C	BTT1	P40314	149 aa	Predicted RBP	4.66	□□□□□ -1.66
SIR2	YDL042C	NAS6	P50086	228 aa		4.66	□□□□□ -1.66
SIR2	YDL042C	VPS20	Q04272	221 aa		4.66	□□□□□ -1.66
SIR2	YDL042C	GAS2	Q06135	555 aa		4.66	□□□□□ -1.66
SIR2	YDL042C	HKR1	P41809	1802 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	FIG2	P25653	1609 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	CDC37	P06101	506 aa	Known RBP	4.65	□□□□□ -1.66
SIR2	YDL042C	RPS19A	P07280	144 aa	Known RBP	4.65	□□□□□ -1.66
SIR2	YDL042C	RPS19B	P07281	144 aa	Predicted RBP	4.65	□□□□□ -1.66
SIR2	YDL042C	PRS1	P32895	427 aa	Known RBP	4.65	□□□□□ -1.66
SIR2	YDL042C	SPL2	P38839	148 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	YDR089W	P38966	869 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	PES4	P39684	611 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	YCH1	P42937	148 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	ENT5	Q03769	411 aa	Known RBP	4.65	□□□□□ -1.66
SIR2	YDL042C	TRM82	Q03774	444 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	STE23	Q06010	1027 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	DNL4	Q08387	944 aa	Predicted RBP	4.65	□□□□□ -1.66
SIR2	YDL042C	HIF1	Q12373	385 aa		4.65	□□□□□ -1.66
SIR2	YDL042C	CMK2	P22517	447 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	ERG9	P29704	444 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	PMT2	P31382	759 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	WSC4	P38739	605 aa		4.64	□□□□□ -1.67

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