RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C STB1P42845 420 aa2.48□□□□□ -2.01
SRD1YCR018C TIS11P47977 285 aa2.48□□□□□ -2.01
SRD1YCR018C BIO3P50277 480 aa2.48□□□□□ -2.01
SRD1YCR018C MKC7P53379 596 aa2.48□□□□□ -2.01
SRD1YCR018C NRM1P53718 249 aa2.48□□□□□ -2.01
SRD1YCR018C EGD1Q02642 157 aaKnown RBP2.48□□□□□ -2.01
SRD1YCR018C MCH1Q07376 486 aa2.48□□□□□ -2.01
SRD1YCR018C SLM3Q12093 417 aa2.48□□□□□ -2.01
SRD1YCR018C RPN6Q12377 434 aa2.48□□□□□ -2.01
SRD1YCR018C PAA1Q12447 191 aaKnown RBP2.48□□□□□ -2.01
SRD1YCR018C MON2P48563 1636 aaPredicted RBP2.48□□□□□ -2.01
SRD1YCR018C PSK1P31374 1356 aa2.48□□□□□ -2.01
SRD1YCR018C RAD7P06779 565 aa2.47□□□□□ -2.01
SRD1YCR018C HSP26P15992 214 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SRD1YCR018C SPR1P32603 445 aa2.47□□□□□ -2.01
SRD1YCR018C ZRT1P32804 376 aa2.47□□□□□ -2.01
SRD1YCR018C KTI12P34253 313 aaKnown RBP2.47□□□□□ -2.01
SRD1YCR018C UTH1P36135 365 aa2.47□□□□□ -2.01
SRD1YCR018C INA22P40576 216 aa2.47□□□□□ -2.01
SRD1YCR018C HIT1P46973 164 aa2.47□□□□□ -2.01
SRD1YCR018C YGR015CP53208 328 aa2.47□□□□□ -2.01
SRD1YCR018C VHT1P53241 593 aa2.47□□□□□ -2.01
SRD1YCR018C SUR7P54003 302 aa2.47□□□□□ -2.01
SRD1YCR018C MRPS16Q02608 121 aa2.47□□□□□ -2.01
SRD1YCR018C YPL080CQ02826 108 aa2.47□□□□□ -2.01
SRD1YCR018C IRC4Q03036 179 aa2.47□□□□□ -2.01
SRD1YCR018C RRG8Q06109 277 aa2.47□□□□□ -2.01
SRD1YCR018C YLR413WQ06689 675 aa2.47□□□□□ -2.01
SRD1YCR018C VAC14Q06708 880 aa2.47□□□□□ -2.01
SRD1YCR018C SRO7Q12038 1033 aa2.47□□□□□ -2.01
SRD1YCR018C MSS116P15424 664 aaKnown RBP2.46□□□□□ -2.02
SRD1YCR018C BGL2P15703 313 aaKnown RBP2.46□□□□□ -2.02
SRD1YCR018C ERD1P16151 362 aa2.46□□□□□ -2.02
SRD1YCR018C UGA1P17649 471 aa2.46□□□□□ -2.02
SRD1YCR018C RAD23P32628 398 aaKnown RBP2.46□□□□□ -2.02
SRD1YCR018C RPC25P35718 212 aa2.46□□□□□ -2.02
SRD1YCR018C EBP2P36049 427 aaKnown RBP2.46□□□□□ -2.02
SRD1YCR018C YKL162CP36052 402 aa2.46□□□□□ -2.02
SRD1YCR018C DSE1P40077 573 aa2.46□□□□□ -2.02
SRD1YCR018C YJR054WP47114 497 aa2.46□□□□□ -2.02
SRD1YCR018C YGL262WP53054 175 aa2.46□□□□□ -2.02
SRD1YCR018C YPS5P53057 165 aa2.46□□□□□ -2.02
SRD1YCR018C VEL1P53058 206 aa2.46□□□□□ -2.02
SRD1YCR018C PNC1P53184 216 aaKnown RBP2.46□□□□□ -2.02
SRD1YCR018C MRX11Q03079 207 aa2.46□□□□□ -2.02
SRD1YCR018C ADD37Q03233 198 aa2.46□□□□□ -2.02
SRD1YCR018C PBP4Q07362 185 aaKnown RBP2.46□□□□□ -2.02
SRD1YCR018C YPQ1Q12010 308 aa2.46□□□□□ -2.02
SRD1YCR018C MRPL23Q12487 163 aaPredicted RBP2.46□□□□□ -2.02
SRD1YCR018C MHP1P43638 1398 aa2.46□□□□□ -2.02
SRD1YCR018C REP1P03871 373 aa2.45□□□□□ -2.02
SRD1YCR018C DBP3P20447 523 aaKnown RBP2.45□□□□□ -2.02
SRD1YCR018C RPL5P26321 297 aaKnown RBP2.45□□□□□ -2.02
SRD1YCR018C DTR1P38125 572 aa2.45□□□□□ -2.02
SRD1YCR018C SHE1P38200 338 aa2.45□□□□□ -2.02
SRD1YCR018C SEH1P53011 349 aaKnown RBP2.45□□□□□ -2.02
SRD1YCR018C ERV25P54837 211 aaKnown RBP2.45□□□□□ -2.02
SRD1YCR018C UBX2Q04228 584 aa2.45□□□□□ -2.02
SRD1YCR018C YMR111CQ04461 462 aaPredicted RBP2.45□□□□□ -2.02
SRD1YCR018C APC4Q04601 652 aa2.45□□□□□ -2.02
SRD1YCR018C DTD1Q07648 150 aaKnown RBP2.45□□□□□ -2.02
SRD1YCR018C RDL2Q08742 149 aaKnown RBP2.45□□□□□ -2.02
SRD1YCR018C TAF10Q12030 206 aa2.45□□□□□ -2.02
SRD1YCR018C STE2D6VTK4 431 aa2.44□□□□□ -2.02
SRD1YCR018C SPS100P13130 326 aa2.44□□□□□ -2.02
SRD1YCR018C EPT1P22140 391 aa2.44□□□□□ -2.02
SRD1YCR018C CSM1P25651 190 aa2.44□□□□□ -2.02
SRD1YCR018C ICL1P28240 557 aaPredicted RBP2.44□□□□□ -2.02
SRD1YCR018C PDC2P32896 925 aa2.44□□□□□ -2.02
SRD1YCR018C SHE3P38272 425 aaKnown RBP2.44□□□□□ -2.02
SRD1YCR018C YHR035WP38769 630 aa2.44□□□□□ -2.02
SRD1YCR018C MEP1P40260 492 aa2.44□□□□□ -2.02
SRD1YCR018C LOC1P43586 204 aaPredicted RBP2.44□□□□□ -2.02
SRD1YCR018C COX16P47081 118 aa2.44□□□□□ -2.02
SRD1YCR018C KEL2P50090 882 aa2.44□□□□□ -2.02
SRD1YCR018C OKP1P53298 406 aa2.44□□□□□ -2.02
SRD1YCR018C YGR266WP53326 701 aa2.44□□□□□ -2.02
SRD1YCR018C TPS1Q00764 495 aaKnown RBP2.44□□□□□ -2.02
SRD1YCR018C RPL21AQ02753 160 aaKnown RBP2.44□□□□□ -2.02
SRD1YCR018C SPO19Q03029 223 aa2.44□□□□□ -2.02
SRD1YCR018C MRX9Q07349 420 aaKnown RBP2.44□□□□□ -2.02
SRD1YCR018C YOR376WQ08900 122 aa2.44□□□□□ -2.02
SRD1YCR018C MMT2Q08970 484 aa2.44□□□□□ -2.02
SRD1YCR018C SIA1Q12212 622 aa2.44□□□□□ -2.02
SRD1YCR018C INO2P26798 304 aa2.43□□□□□ -2.02
SRD1YCR018C SPS19P32573 292 aaKnown RBP2.43□□□□□ -2.02
SRD1YCR018C SWD2P36104 329 aaPredicted RBP2.43□□□□□ -2.02
SRD1YCR018C SLX1P38324 304 aa2.43□□□□□ -2.02
SRD1YCR018C TDA11P38854 504 aa2.43□□□□□ -2.02
SRD1YCR018C RTT105P40063 208 aa2.43□□□□□ -2.02
SRD1YCR018C CDC40P40968 455 aaPredicted RBP2.43□□□□□ -2.02
SRD1YCR018C PMT4P46971 762 aa2.43□□□□□ -2.02
SRD1YCR018C RMI1Q02685 241 aa2.43□□□□□ -2.02
SRD1YCR018C SNX41Q04053 625 aa2.43□□□□□ -2.02
SRD1YCR018C VTI1Q04338 217 aa2.43□□□□□ -2.02
SRD1YCR018C YLR012CQ07927 99 aa2.43□□□□□ -2.02
SRD1YCR018C RPN8Q08723 338 aaKnown RBP2.43□□□□□ -2.02
SRD1YCR018C UTP23Q12339 254 aaKnown RBP2.43□□□□□ -2.02
SRD1YCR018C ERP3Q12403 225 aa2.43□□□□□ -2.02
SRD1YCR018C PRM4Q12498 284 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 95.1 ms