RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	CPD1	P53314	239 aa		4.39	□□□□□ -1.71
SMP1	YBR182C	COS1	P53822	381 aa		4.39	□□□□□ -1.71
SMP1	YBR182C	RPL15B	P54780	204 aa	Predicted RBP	4.39	□□□□□ -1.71
SMP1	YBR182C	PRM6	Q04705	352 aa		4.39	□□□□□ -1.71
SMP1	YBR182C	DIB1	Q06819	143 aa	Predicted RBP	4.39	□□□□□ -1.71
SMP1	YBR182C	GET4	Q12125	312 aa		4.39	□□□□□ -1.71
SMP1	YBR182C	HTZ1	Q12692	134 aa	Known RBP	4.39	□□□□□ -1.71
SMP1	YBR182C	MTF1	P14908	341 aa	Known RBP	4.38	□□□□□ -1.71
SMP1	YBR182C	OSM1	P21375	501 aa	Known RBP	4.38	□□□□□ -1.71
SMP1	YBR182C	RPS5	P26783	225 aa	Known RBP	4.38	□□□□□ -1.71
SMP1	YBR182C	PHA2	P32452	334 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	ECM4	P36156	370 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	SMF2	P38778	549 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	PFS1	P38872	237 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	YIR016W	P40572	265 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	TES1	P41903	349 aa	Known RBP	4.38	□□□□□ -1.71
SMP1	YBR182C	YNL320W	P42840	284 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	YFL040W	P43562	540 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	TAD2	P47058	250 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	RPM2	Q02773	1202 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	YMR010W	Q03687	405 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	OST6	Q03723	332 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	YMR226C	Q05016	267 aa	Known RBP	4.38	□□□□□ -1.71
SMP1	YBR182C	THI7	Q05998	598 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	SMC5	Q08204	1093 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	YOR387C	Q08910	206 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	DAP1	Q12091	152 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	POM33	Q12164	279 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	PCL9	Q12477	304 aa		4.38	□□□□□ -1.71
SMP1	YBR182C	PIS1	P06197	220 aa	Known RBP	4.37	□□□□□ -1.71
SMP1	YBR182C	RPL31A	P0C2H8	113 aa	Known RBP	4.37	□□□□□ -1.71
SMP1	YBR182C	REV1	P12689	985 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	CSE1	P33307	960 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	MIX23	P38162	196 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	MTC6	P38849	526 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	DDI1	P40087	428 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	YIA6	P40556	373 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	OST1	P41543	476 aa	Known RBP	4.37	□□□□□ -1.71
SMP1	YBR182C	MDV1	P47025	714 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	LSG1	P53145	640 aa	Known RBP	4.37	□□□□□ -1.71
SMP1	YBR182C	EFM5	P53200	248 aa	Known RBP	4.37	□□□□□ -1.71
SMP1	YBR182C	SWC4	P53201	476 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	IBD2	P53892	351 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	YBL111C	Q3E7Y5	667 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	YCR024C-B	Q3E7Z8	88 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	NCB2	Q92317	146 aa		4.37	□□□□□ -1.71
SMP1	YBR182C	RHO1	P06780	209 aa	Known RBP	4.36	□□□□□ -1.71
SMP1	YBR182C	ATR1	P13090	542 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	NAT2	P37293	288 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	ECM8	P38246	354 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	RFC4	P40339	323 aa	Known RBP	4.36	□□□□□ -1.71
SMP1	YBR182C	SNX41	Q04053	625 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	YMR027W	Q04371	470 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	SPO77	Q06134	477 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	YLR012C	Q07927	99 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	DDC1	Q08949	612 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	RRP42	Q12277	265 aa	Predicted RBP	4.36	□□□□□ -1.71
SMP1	YBR182C	UTP23	Q12339	254 aa	Known RBP	4.36	□□□□□ -1.71
SMP1	YBR182C	EAF3	Q12432	401 aa		4.36	□□□□□ -1.71
SMP1	YBR182C	YPK2	P18961	677 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	RPL16A	P26784	199 aa	Known RBP	4.35	□□□□□ -1.71
SMP1	YBR182C	RPL16B	P26785	198 aa	Known RBP	4.35	□□□□□ -1.71
SMP1	YBR182C	VMA6	P32366	345 aa	Known RBP	4.35	□□□□□ -1.71
SMP1	YBR182C	IES6	P32617	166 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	PMU1	P36069	295 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	AVT5	P38176	459 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	NPT1	P39683	429 aa	Known RBP	4.35	□□□□□ -1.71
SMP1	YBR182C	MAM33	P40513	266 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	YIL029C	P40538	142 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	RPL10	P41805	221 aa	Known RBP	4.35	□□□□□ -1.71
SMP1	YBR182C	PSA1	P41940	361 aa	Known RBP	4.35	□□□□□ -1.71
SMP1	YBR182C	HAM1	P47119	197 aa	Known RBP	4.35	□□□□□ -1.71
SMP1	YBR182C	MRM2	P53123	320 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	YDR209C	Q03480	137 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	VBA1	Q04301	562 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	SEY1	Q99287	776 aa		4.35	□□□□□ -1.71
SMP1	YBR182C	THP2	O13539	261 aa	Known RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	CTA1	P15202	515 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	HEM15	P16622	393 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	STE18	P18852	110 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	ATO2	P32907	282 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	MTC4	P38335	694 aa	Known RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	RCK2	P38623	610 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	YHB1	P39676	399 aa	Known RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	THO1	P40040	218 aa	Known RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	YRB1	P41920	201 aa	Known RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	WWM1	P43582	211 aa	Known RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	PMT4	P46971	762 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	TIS11	P47977	285 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	MST27	P53176	234 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	CUS2	P53830	285 aa	Predicted RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	GOR1	P53839	350 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	YLR281C	Q05863	155 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	RDL2	Q08742	149 aa	Known RBP	4.34	□□□□□ -1.71
SMP1	YBR182C	ICT1	Q12385	394 aa		4.34	□□□□□ -1.71
SMP1	YBR182C	IKI3	Q06706	1349 aa	Known RBP	4.34	□□□□□ -1.72
SMP1	YBR182C	RPL20A	P0CX23	172 aa	Known RBP	4.33	□□□□□ -1.72
SMP1	YBR182C	RPL20B	P0CX24	172 aa	Predicted RBP	4.33	□□□□□ -1.72
SMP1	YBR182C	AGA1	P32323	725 aa		4.33	□□□□□ -1.72
SMP1	YBR182C	MRPL6	P32904	214 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms