RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LINC00271P0C7V0 271 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 SRGAP2CP0DJJ0 459 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 RPA1P27694 616 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 CTNNB1P35222 781 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 BMPR1AP36894 532 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 RARRES1P49788 294 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 PAN2Q504Q3 1202 aaKnown RBP16.75■□□□□ 0.27
PHGDH-231ENST00000641939 FERMT3Q86UX7 667 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 NACC1Q96RE7 527 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 ELAC1Q9H777 363 aaKnown RBP16.75■□□□□ 0.27
PHGDH-231ENST00000641939 ATP6V0A4Q9HBG4 840 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 XPNPEP1Q9NQW7 623 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 CHST12Q9NRB3 414 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 TMEM161AQ9NX61 479 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 LRWD1Q9UFC0 647 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 ATG2AQ2TAZ0 1938 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 XIRP2A4UGR9 3374 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 NCOR1O75376 2440 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 C5orf67F2Z3F1 127 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 RB1P06400 928 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 GATMP50440 423 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 GPM6BQ13491 265 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 PDIA5Q14554 519 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-231ENST00000641939 HAUS3Q68CZ6 603 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 IGSF22Q8N9C0 903 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 RAB34Q9BZG1 259 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 DACT1Q9NYF0 836 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 DBR1Q9UK59 544 aaKnown RBP16.74■□□□□ 0.27
PHGDH-231ENST00000641939 STK24Q9Y6E0 443 aa16.74■□□□□ 0.27
PHGDH-231ENST00000641939 MRPL42Q9Y6G3 142 aaKnown RBP16.74■□□□□ 0.27
PHGDH-231ENST00000641939 TTC28Q96AY4 2481 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 MUTP22033 750 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 PRPHP41219 470 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 PTPROQ16827 1216 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 FAM102BQ5T8I3 360 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 CATSPER4Q7RTX7 472 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 C11orf84Q9BUA3 381 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-231ENST00000641939 PLVAPQ9BX97 442 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 PRDM6Q9NQX0 595 aa16.73■□□□□ 0.27
PHGDH-231ENST00000641939 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 TBKBP1A7MCY6 615 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 HOXA2O43364 376 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 USO1O60763 962 aaKnown RBP16.72■□□□□ 0.27
PHGDH-231ENST00000641939 FGFR1P11362 822 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 PDCP20941 246 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 CCT6AP40227 531 aaKnown RBP16.72■□□□□ 0.27
PHGDH-231ENST00000641939 PHKA2P46019 1235 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 SKIV2LQ15477 1246 aaKnown RBP16.72■□□□□ 0.27
PHGDH-231ENST00000641939 ECHDC2Q86YB7 292 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
PHGDH-231ENST00000641939 MRPL38Q96DV4 380 aaKnown RBP16.72■□□□□ 0.27
PHGDH-231ENST00000641939 PIN4Q9Y237 131 aaKnown RBP16.72■□□□□ 0.27
PHGDH-231ENST00000641939 EOMESO95936 686 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 ARL2P36404 184 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 PTENP60484 403 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 ATP2C1P98194 919 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-231ENST00000641939 POU5F1BQ06416 359 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 TFDP1Q14186 410 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 TWF2Q6IBS0 349 aaKnown RBP16.71■□□□□ 0.27
PHGDH-231ENST00000641939 BRAPQ7Z569 592 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 RNF169Q8NCN4 708 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 MCPH1Q8NEM0 835 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 INTS4Q96HW7 963 aaKnown RBP16.71■□□□□ 0.27
PHGDH-231ENST00000641939 TRAIPQ9BWF2 469 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 TMEM117Q9H0C3 514 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 MINDY3Q9H8M7 445 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 THEGQ9P2T0 379 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 PLXNA4Q9HCM2 1894 aa16.71■□□□□ 0.27
PHGDH-231ENST00000641939 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-231ENST00000641939 ARHGEF35A5YM69 484 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 K7ELQ4 463 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-231ENST00000641939 GLRA2P23416 452 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
PHGDH-231ENST00000641939 IL17AQ16552 155 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 ECM1Q16610 540 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 NAALADL2Q58DX5 795 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 SPOUT1Q5T280 376 aaKnown RBP16.7■□□□□ 0.26
PHGDH-231ENST00000641939 KRT79Q5XKE5 535 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 ZNF598Q86UK7 904 aaKnown RBP16.7■□□□□ 0.26
PHGDH-231ENST00000641939 ABI1Q8IZP0 508 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 P2RX5Q93086 422 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-231ENST00000641939 AGPAT5Q9NUQ2 364 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 RNF19AQ9NV58 838 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 KIAA1024Q9UPX6 916 aa16.7■□□□□ 0.26
PHGDH-231ENST00000641939 GRM6O15303 877 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 SKIP12755 728 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 ATF7P17544 494 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-231ENST00000641939 RAB27AP51159 221 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 CAPSQ13938 189 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 TIGD5Q53EQ6 642 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 PADI6Q6TGC4 694 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms