RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PEX3P56589 373 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 ITIH3Q06033 890 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 C10orf76Q5T2E6 689 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 C4orf19Q8IY42 314 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 U2AF1L4Q8WU68 220 aaKnown RBP18.48■□□□□ 0.55
PHGDH-229ENST00000641891 ACCSQ96QU6 501 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 TCEAL9Q9UHQ7 104 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 TSKSQ9UJT2 592 aa18.48■□□□□ 0.55
PHGDH-229ENST00000641891 PHIPQ8WWQ0 1821 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 BTNL10A8MVZ5 291 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 WDR64B1ANS9 1081 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 FERP16591 822 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 MCM3P25205 808 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 NOP2P46087 812 aaKnown RBP18.47■□□□□ 0.55
PHGDH-229ENST00000641891 PSMC5P62195 406 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 XKR9Q5GH70 373 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 FAM102BQ5T8I3 360 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 CCNI2Q6ZMN8 369 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-229ENST00000641891 HAUS6Q7Z4H7 955 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 KIFC3Q9BVG8 833 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 STK33Q9BYT3 514 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 RNASE9P60153 205 aaKnown RBP18.47■□□□□ 0.55
PHGDH-229ENST00000641891 ARHGAP44Q17R89 818 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 PHLDB3Q6NSJ2 640 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 SAMD3Q8N6K7 520 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 TMEM206Q9H813 350 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 AS3MTQ9HBK9 375 aa18.47■□□□□ 0.55
PHGDH-229ENST00000641891 EMSYQ7Z589 1322 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 SORBS3O60504 671 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 EIF3JO75822 258 aaKnown RBP18.46■□□□□ 0.55
PHGDH-229ENST00000641891 NR3C2P08235 984 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 MAPTP10636 758 aaKnown RBP18.46■□□□□ 0.55
PHGDH-229ENST00000641891 JAK3P52333 1124 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 PPP3CAQ08209 521 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 TMEM132BQ14DG7 1078 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 CFAP221Q4G0U5 840 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 GLYCTKQ8IVS8 523 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 LMO3Q8TAP4 145 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 PLEKHO2Q8TD55 490 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 APEX2Q9UBZ4 518 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 ZNF214Q9UL59 606 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-229ENST00000641891 LTBP3Q9NS15 1303 aa18.46■□□□□ 0.55
PHGDH-229ENST00000641891 KRT13P13646 458 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 CCND2P30279 289 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 SOX10P56693 466 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 GTF2BQ00403 316 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 KRT76Q01546 638 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 MAP9Q49MG5 647 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 C1orf220Q5T0J3 134 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 ANO5Q75V66 913 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 VSIG10LQ86VR7 867 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 HSPBP1Q9NZL4 362 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 GOLGA8IPA6NC78 632 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 GOLGA8JA6NMD2 632 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 TMCO5BA8MYB1 307 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 TULP1O00294 542 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-229ENST00000641891 DSG3P32926 999 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 VAMP7P51809 220 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 ALCAMQ13740 583 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 MYBPC2Q14324 1141 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 CCDC70Q6NSX1 233 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 VPS36Q86VN1 386 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 MSL3Q8N5Y2 521 aaKnown RBP18.45■□□□□ 0.54
PHGDH-229ENST00000641891 LRRC57Q8N9N7 239 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 SLC30A5Q8TAD4 765 aa18.45■□□□□ 0.54
PHGDH-229ENST00000641891 INPP4AQ96PE3 977 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-229ENST00000641891 DOCK5Q9H7D0 1870 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 RGS20O76081 388 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 H2AFZP0C0S5 128 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 FDX1P10109 184 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 SFNP31947 248 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 GCLMP48507 274 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 NCKAP1LP55160 1127 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 SP4Q02446 784 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 PRKG1Q13976 671 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 H2AFVQ71UI9 128 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 NLRX1Q86UT6 975 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 ARHGEF19Q8IW93 802 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 CCDC102AQ96A19 550 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 SELENOOQ9BVL4 669 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 MOV10L1Q9BXT6 1211 aaKnown RBP18.44■□□□□ 0.54
PHGDH-229ENST00000641891 PLEKHA4Q9H4M7 779 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.44■□□□□ 0.541e-6■■■■■ 90
PHGDH-229ENST00000641891 GGA3Q9NZ52 723 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 HPCAL4Q9UM19 191 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 SSC5DA1L4H1 1573 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 ZNF862O60290 1169 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 ANXA13P27216 316 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 GPS2Q13227 327 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 INTS8Q75QN2 995 aaKnown RBP18.44■□□□□ 0.54
PHGDH-229ENST00000641891 TPCN2Q8NHX9 752 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 BSNDQ8WZ55 320 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 SYT11Q9BT88 431 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 GABBR1Q9UBS5 961 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 PNMA2Q9UL42 364 aa18.44■□□□□ 0.54
PHGDH-229ENST00000641891 CCDC169A6NNP5 214 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 ANKRD63C9JTQ0 380 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 ADRB2P07550 413 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 KCNA2P16389 499 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 GALCP54803 685 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms