RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 POLR3FQ9H1D9 316 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-227ENST00000641811 C1orf112Q9NSG2 853 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 LRFN2Q9ULH4 789 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 CLIC4Q9Y696 253 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 COL4A6Q14031 1691 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 TRANK1O15050 2925 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 ARHGEF35A5YM69 484 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 E9PMD0 336 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 ASAP2O43150 1006 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 STAG3L1P0CL83 205 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-227ENST00000641811 MUTP22033 750 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 ARL2P36404 184 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 FAM189BP81408 668 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
PHGDH-227ENST00000641811 PAN2Q504Q3 1202 aaKnown RBP19.25■□□□□ 0.67
PHGDH-227ENST00000641811 ARL6IP4Q66PJ3 421 aaKnown RBP19.25■□□□□ 0.67
PHGDH-227ENST00000641811 PADI6Q6TGC4 694 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 CATSPER4Q7RTX7 472 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 MAFAQ8NHW3 353 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-227ENST00000641811 GDPD5Q8WTR4 605 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 INO80BQ9C086 356 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-227ENST00000641811 BHMT2Q9H2M3 363 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 POLD4Q9HCU8 107 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 PCDHB7Q9Y5E2 793 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 ADGRA3Q8IWK6 1321 aa19.25■□□□□ 0.67
PHGDH-227ENST00000641811 SFPQP23246 707 aaKnown RBP eCLIP19.24■□□□□ 0.67
PHGDH-227ENST00000641811 GLRA2P23416 452 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 GRIN1Q05586 938 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 CAPSQ13938 189 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 BTG3Q14201 252 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-227ENST00000641811 MXD4Q14582 209 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-227ENST00000641811 FAM102BQ5T8I3 360 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 FOXD4L5Q5VV16 416 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-227ENST00000641811 KCNK18Q7Z418 384 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 FIBCD1Q8N539 461 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 FOXD4L4Q8WXT5 416 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-227ENST00000641811 PLIN2Q99541 437 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
PHGDH-227ENST00000641811 FGFR1P11362 822 aa19.23■□□□□ 0.67
PHGDH-227ENST00000641811 CYP11B2P19099 503 aa19.23■□□□□ 0.67
PHGDH-227ENST00000641811 CEBPZQ03701 1054 aaKnown RBP19.23■□□□□ 0.67
PHGDH-227ENST00000641811 GRB10Q13322 594 aa19.23■□□□□ 0.67
PHGDH-227ENST00000641811 FAM43BQ6ZT52 329 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-227ENST00000641811 SRGAP1Q7Z6B7 1085 aa19.23■□□□□ 0.67
PHGDH-227ENST00000641811 PPM1EQ8WY54 764 aa19.23■□□□□ 0.67
PHGDH-227ENST00000641811 PNMA5Q96PV4 448 aa19.23■□□□□ 0.67
PHGDH-227ENST00000641811 PIN4Q9Y237 131 aaKnown RBP19.23■□□□□ 0.67
PHGDH-227ENST00000641811 LPXNO60711 386 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 EYA4O95677 639 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 BMP15O95972 392 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 LINC00271P0C7V0 271 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 PHKA2P46019 1235 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 PTENP60484 403 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 TFDP1Q14186 410 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 PTPAQ15257 358 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 CCDC85BQ15834 202 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-227ENST00000641811 EPC2Q52LR7 807 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 ECHDC2Q86YB7 292 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 TMEM192Q8IY95 271 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 RNF169Q8NCN4 708 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 MCPH1Q8NEM0 835 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 FBXO22Q8NEZ5 403 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 TMEM161AQ9NX61 479 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 DNM3Q9UQ16 869 aa19.22■□□□□ 0.67
PHGDH-227ENST00000641811 MRPL42Q9Y6G3 142 aaKnown RBP19.22■□□□□ 0.67
PHGDH-227ENST00000641811 MARCKSP29966 332 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-227ENST00000641811 TWF2Q6IBS0 349 aaKnown RBP19.21■□□□□ 0.67
PHGDH-227ENST00000641811 CABP7Q86V35 215 aa19.21■□□□□ 0.67
PHGDH-227ENST00000641811 CMTR2Q8IYT2 770 aaKnown RBP19.21■□□□□ 0.67
PHGDH-227ENST00000641811 MICALL1Q8N3F8 863 aa19.21■□□□□ 0.67
PHGDH-227ENST00000641811 BSNDQ8WZ55 320 aa19.21■□□□□ 0.67
PHGDH-227ENST00000641811 ZSCAN16Q9H4T2 348 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-227ENST00000641811 ELAC1Q9H777 363 aaKnown RBP19.21■□□□□ 0.67
PHGDH-227ENST00000641811 CHST12Q9NRB3 414 aa19.21■□□□□ 0.67
PHGDH-227ENST00000641811 RNF19AQ9NV58 838 aa19.21■□□□□ 0.67
PHGDH-227ENST00000641811 MTCH2Q9Y6C9 303 aa19.21■□□□□ 0.67
PHGDH-227ENST00000641811 A0A0U1RQF3 1178 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 LRRIQ4A6NIV6 560 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 TBKBP1A7MCY6 615 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 INO80B-WBP1J3KQ70 363 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 ATF7P17544 494 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-227ENST00000641811 HOXA11P31270 313 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-227ENST00000641811 CTNNB1P35222 781 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 LONRF3Q496Y0 759 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 HYIQ5T013 277 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 USP28Q96RU2 1077 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 AGPAT5Q9NUQ2 364 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 DACT1Q9NYF0 836 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 HCSTQ9UBK5 93 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 EYSQ5T1H1 3165 aa19.2■□□□□ 0.66
PHGDH-227ENST00000641811 COL4A4P53420 1690 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-227ENST00000641811 BMPR1AP36894 532 aa19.19■□□□□ 0.66
PHGDH-227ENST00000641811 MBTD1Q05BQ5 628 aa19.19■□□□□ 0.66
PHGDH-227ENST00000641811 POU5F1BQ06416 359 aa19.19■□□□□ 0.66
PHGDH-227ENST00000641811 PKP1Q13835 747 aa19.19■□□□□ 0.66
PHGDH-227ENST00000641811 ZNF598Q86UK7 904 aaKnown RBP19.19■□□□□ 0.66
PHGDH-227ENST00000641811 IFNLR1Q8IU57 520 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-227ENST00000641811 CLP1Q92989 425 aaKnown RBP19.19■□□□□ 0.66
PHGDH-227ENST00000641811 AK8Q96MA6 479 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms