RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-238ENST00000641523 TCTN2Q96GX1 697 aa7.56□□□□□ -1.2
CASC19-238ENST00000641523 SCLYQ96I15 445 aa7.56□□□□□ -1.2
CASC19-238ENST00000641523 MRIQ9BWK5 157 aa7.56□□□□□ -1.2
CASC19-238ENST00000641523 PUS3Q9BZE2 481 aaKnown RBP7.56□□□□□ -1.2
CASC19-238ENST00000641523 VEZTQ9HBM0 779 aa7.56□□□□□ -1.2
CASC19-238ENST00000641523 INTS7Q9NVH2 962 aaKnown RBP7.56□□□□□ -1.2
CASC19-238ENST00000641523 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
CASC19-238ENST00000641523 RNF186Q9NXI6 227 aa7.56□□□□□ -1.2
CASC19-238ENST00000641523 TMOD2Q9NZR1 351 aa7.56□□□□□ -1.2
CASC19-238ENST00000641523 ANGEL1Q9UNK9 670 aaKnown RBP7.56□□□□□ -1.2
CASC19-238ENST00000641523 PDE4DIPQ5VU43 2346 aa7.56□□□□□ -1.2
CASC19-238ENST00000641523 A0A1B0GUL6 1792 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 MANSC4A6NHS7 340 aaPredicted RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 HMGB1P1B2RPK0 211 aaPredicted RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 AURKAO14965 403 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 PDGFRBP09619 1106 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 IFNGR1P15260 489 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 SOX5P35711 763 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 RARSP54136 660 aaKnown RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 PKN2Q16513 984 aaKnown RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 LONRF3Q496Y0 759 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 LRRC24Q50LG9 513 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 CT47A1Q5JQC4 288 aaPredicted RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 CDKAL1Q5VV42 579 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 PRAMEF18Q5VWM3 479 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 OTUD7BQ6GQQ9 843 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 KCNT2Q6UVM3 1135 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 PRR23CQ6ZRP0 262 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 VGLL2Q8N8G2 317 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 FAM181AQ8N9Y4 354 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 WDR66Q8TBY9 1149 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 DDX1Q92499 740 aaKnown RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 FCRL3Q96P31 734 aaPredicted RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 RPS6KC1Q96S38 1066 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 NOB1Q9ULX3 412 aaKnown RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 ATP8A1Q9Y2Q0 1164 aa7.55□□□□□ -1.2
CASC19-238ENST00000641523 TNPO3Q9Y5L0 923 aaKnown RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 ZNF646O15015 1829 aaPredicted RBP7.55□□□□□ -1.2
CASC19-238ENST00000641523 CLRN2A0PK11 232 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 C2orf71A6NGG8 1288 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 EFCAB14O75071 495 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 THBDP07204 575 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 SRFP11831 508 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 FGFR2P21802 821 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 IL15P40933 162 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 TM4SF4P48230 202 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 NFKB2Q00653 900 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 CHAF1AQ13111 956 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 ZNF460Q14592 562 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 C4orf46Q504U0 113 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 ZFYVE27Q5T4F4 411 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 FKBP1CQ5VVH2 108 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 RNF43Q68DV7 783 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 DDX42Q86XP3 938 aaKnown RBP eCLIP7.54□□□□□ -1.2
CASC19-238ENST00000641523 ZNF655Q8N720 491 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 FRS2Q8WU20 508 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 PRMT6Q96LA8 375 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 MCOLN1Q9GZU1 580 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 ZNF70Q9UC06 446 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 PNMA2Q9UL42 364 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 MAPRE3Q9UPY8 281 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 JAG2Q9Y219 1238 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 ST14Q9Y5Y6 855 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 AKAP11Q9UKA4 1901 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 ARNTLO00327 626 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 PRC1O43663 620 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 OPA1O60313 960 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 WDHD1O75717 1129 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 RFX5P48382 616 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 CDKN1CP49918 316 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 OXCT1P55809 520 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 PRKG1Q13976 671 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 ATP2B3Q16720 1220 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 NKPD1Q17RQ9 610 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 HHIPL2Q6UWX4 724 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 MOB2Q70IA6 237 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 CTU1Q7Z7A3 348 aaKnown RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 COPS5Q92905 334 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 MAGEB10Q96LZ2 347 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 GPATCH2Q9NW75 528 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 TMEFF2Q9UIK5 374 aaPredicted RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
CASC19-238ENST00000641523 PCDHA9Q9Y5H5 950 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 BACE2Q9Y5Z0 518 aa7.54□□□□□ -1.2
CASC19-238ENST00000641523 CASP8AP2Q9UKL3 1982 aa7.53□□□□□ -1.2
CASC19-238ENST00000641523 RASGRP1O95267 797 aa7.53□□□□□ -1.2
CASC19-238ENST00000641523 VAV1P15498 845 aa7.53□□□□□ -1.2
CASC19-238ENST00000641523 NOP2P46087 812 aaKnown RBP7.53□□□□□ -1.2
CASC19-238ENST00000641523 PCBP1Q15365 356 aaKnown RBP eCLIP7.53□□□□□ -1.2
CASC19-238ENST00000641523 ODR4Q5SWX8 454 aa7.53□□□□□ -1.2
CASC19-238ENST00000641523 MAMDC2Q7Z304 686 aaPredicted RBP7.53□□□□□ -1.2
CASC19-238ENST00000641523 STRA8Q7Z7C7 330 aa7.53□□□□□ -1.2
CASC19-238ENST00000641523 FAM83AQ86UY5 434 aa7.53□□□□□ -1.2
CASC19-238ENST00000641523 PPIL6Q8IXY8 311 aa7.53□□□□□ -1.2
CASC19-238ENST00000641523 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms