RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 RTP1P59025 263 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 LAMTOR4Q0VGL1 99 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 KCNB1Q14721 858 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 KMT5BQ4FZB7 885 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 ZNF410Q86VK4 478 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 SFR1Q86XK3 245 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 RNF149Q8NC42 400 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
PHGDH-218ENST00000641491 DNAJB3Q8WWF6 145 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 PRPF31Q8WWY3 499 aaKnown RBP14.29□□□□□ -0.12
PHGDH-218ENST00000641491 PPP1R16BQ96T49 567 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 NAT10Q9H0A0 1025 aaKnown RBP14.29□□□□□ -0.12
PHGDH-218ENST00000641491 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-218ENST00000641491 GPRC5CQ9NQ84 441 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 PRDM5Q9NQX1 630 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-218ENST00000641491 TRMT13Q9NUP7 481 aaKnown RBP14.29□□□□□ -0.12
PHGDH-218ENST00000641491 SFI1A8K8P3 1242 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 ZBTB42B2RXF5 422 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 ERLIN2O94905 339 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 VTNP04004 478 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 CTSHP09668 335 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 SFPQP23246 707 aaKnown RBP eCLIP14.28□□□□□ -0.12
PHGDH-218ENST00000641491 CASP1P29466 404 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.12
PHGDH-218ENST00000641491 STX1AQ16623 288 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 TRIM60Q495X7 471 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 ARSHQ5FYA8 562 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 APBB1IPQ7Z5R6 666 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-218ENST00000641491 SH3RF1Q7Z6J0 888 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 LOXHD1Q8IVV2 1947 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 TSG101Q99816 390 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 TBC1D7Q9P0N9 293 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 TRPV2Q9Y5S1 764 aa14.28□□□□□ -0.12
PHGDH-218ENST00000641491 MYH9P35579 1960 aaKnown RBP14.27□□□□□ -0.12
PHGDH-218ENST00000641491 UBE4BO95155 1302 aa14.27□□□□□ -0.12
PHGDH-218ENST00000641491 IGKV6-21A0A0C4DH24 114 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 INO80B-WBP1J3KQ70 363 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 SOX1O00570 391 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 B4GALT4O60513 344 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 MAPTP10636 758 aaKnown RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 NLRP11P59045 1033 aaKnown RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 ZNF200P98182 395 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 TMEM62Q0P6H9 643 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 MAPK6Q16659 721 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 RUFY4Q6ZNE9 571 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 SERINC5Q86VE9 423 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 LRRC15Q8TF66 581 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 SPIRE2Q8WWL2 714 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 ERCC4Q92889 916 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-218ENST00000641491 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 XPNPEP1Q9NQW7 623 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 OLFML3Q9NRN5 406 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 TMEM63CQ9P1W3 806 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 LAMA3Q16787 3333 aa14.27□□□□□ -0.13
PHGDH-218ENST00000641491 SYCE3A1L190 88 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 K7ERI5 159 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 PSMA7O14818 248 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 SLC16A4O15374 487 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 RHOBTB3O94955 611 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 CLTBP09497 229 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 GLRA2P23416 452 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 ARL2P36404 184 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 NPTX2P47972 431 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 KIZQ2M2Z5 673 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 MARCH8Q5T0T0 291 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-218ENST00000641491 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 ISM2Q6H9L7 571 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 HS2ST1Q7LGA3 356 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 KIAA0319LQ8IZA0 1049 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 SLC43A3Q8NBI5 491 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 ASAP3Q8TDY4 903 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 HVCN1Q96D96 273 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 DNAJC19Q96DA6 116 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 ZBTB10Q96DT7 871 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 LRCH3Q96II8 777 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 ACCSQ96QU6 501 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 HIPK3Q9H422 1215 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 TMEM206Q9H813 350 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 POLD4Q9HCU8 107 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 SLC39A2Q9NP94 309 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
PHGDH-218ENST00000641491 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 DENND3A2RUS2 1198 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 PARNO95453 639 aaKnown RBP14.25□□□□□ -0.13
PHGDH-218ENST00000641491 COL6A1P12109 1028 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms