RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 SRGAP1Q7Z6B7 1085 aa22.49■■□□□ 1.19
HLA-B-256ENST00000639848 TMEM192Q8IY95 271 aa22.49■■□□□ 1.19
HLA-B-256ENST00000639848 TRAIPQ9BWF2 469 aa22.49■■□□□ 1.19
HLA-B-256ENST00000639848 BMP2KQ9NSY1 1161 aaPredicted RBP22.49■■□□□ 1.19
HLA-B-256ENST00000639848 C5orf67F2Z3F1 127 aa22.48■■□□□ 1.19
HLA-B-256ENST00000639848 CSDE1O75534 798 aaKnown RBP22.48■■□□□ 1.19
HLA-B-256ENST00000639848 RB1P06400 928 aa22.48■■□□□ 1.19
HLA-B-256ENST00000639848 LINC00271P0C7V0 271 aa22.48■■□□□ 1.19
HLA-B-256ENST00000639848 CCT6AP40227 531 aaKnown RBP22.48■■□□□ 1.19
HLA-B-256ENST00000639848 SLC17A8Q8NDX2 589 aa22.48■■□□□ 1.19
HLA-B-256ENST00000639848 MCPH1Q8NEM0 835 aa22.48■■□□□ 1.19
HLA-B-256ENST00000639848 GDPD5Q8WTR4 605 aa22.48■■□□□ 1.19
HLA-B-256ENST00000639848 A0A0U1RQF3 1178 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 VPS37CA5D8V6 355 aaPredicted RBP22.47■■□□□ 1.19
HLA-B-256ENST00000639848 HOXA2O43364 376 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 BMP15O95972 392 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 FGFR4P22455 802 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 ARL2P36404 184 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 PHKA2P46019 1235 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 TFDP1Q14186 410 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 PCBP1Q15365 356 aaKnown RBP eCLIP22.47■■□□□ 1.19
HLA-B-256ENST00000639848 RNF149Q8NC42 400 aa22.47■■□□□ 1.19
HLA-B-256ENST00000639848 H3BNC9 293 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 USO1O60763 962 aaKnown RBP22.46■■□□□ 1.19
HLA-B-256ENST00000639848 SRGAP2CP0DJJ0 459 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 BMPR1AP36894 532 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 IL17AQ16552 155 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 KRT79Q5XKE5 535 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 CATSPER4Q7RTX7 472 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 ECHDC2Q86YB7 292 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 IFNLR1Q8IU57 520 aaPredicted RBP22.46■■□□□ 1.19
HLA-B-256ENST00000639848 SNX29Q8TEQ0 813 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 PLVAPQ9BX97 442 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 NFKBIZQ9BYH8 718 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 TRANK1O15050 2925 aa22.46■■□□□ 1.19
HLA-B-256ENST00000639848 LOXHD1Q8IVV2 1947 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 A0A087WWV3 80 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 ARHGEF35A5YM69 484 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 EOMESO95936 686 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 SKIP12755 728 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 SYT1P21579 422 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 CTNNB1P35222 781 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 PTENP60484 403 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 KCTD17Q8N5Z5 321 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 RSPH1Q8WYR4 309 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 C11orf84Q9BUA3 381 aaPredicted RBP22.45■■□□□ 1.18
HLA-B-256ENST00000639848 AGPAT5Q9NUQ2 364 aa22.45■■□□□ 1.18
HLA-B-256ENST00000639848 PIN4Q9Y237 131 aaKnown RBP22.45■■□□□ 1.18
HLA-B-256ENST00000639848 MRPL42Q9Y6G3 142 aaKnown RBP22.45■■□□□ 1.18
HLA-B-256ENST00000639848 ARID2Q68CP9 1835 aa22.44■■□□□ 1.18
HLA-B-256ENST00000639848 ZNF598Q86UK7 904 aaKnown RBP22.44■■□□□ 1.18
HLA-B-256ENST00000639848 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.44■■□□□ 1.18
HLA-B-256ENST00000639848 TMEM117Q9H0C3 514 aa22.44■■□□□ 1.18
HLA-B-256ENST00000639848 MINDY3Q9H8M7 445 aa22.44■■□□□ 1.18
HLA-B-256ENST00000639848 KIAA1024Q9UPX6 916 aa22.44■■□□□ 1.18
HLA-B-256ENST00000639848 CYP11B2P19099 503 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 IBSPP21815 317 aaPredicted RBP22.43■■□□□ 1.18
HLA-B-256ENST00000639848 RAB27AP51159 221 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 GPM6BQ13491 265 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 CAPSQ13938 189 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 CCDC85BQ15834 202 aaPredicted RBP22.43■■□□□ 1.18
HLA-B-256ENST00000639848 ECM1Q16610 540 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 PTPROQ16827 1216 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 PAN2Q504Q3 1202 aaKnown RBP22.43■■□□□ 1.18
HLA-B-256ENST00000639848 NAALADL2Q58DX5 795 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 FAM102BQ5T8I3 360 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 TWF2Q6IBS0 349 aaKnown RBP22.43■■□□□ 1.18
HLA-B-256ENST00000639848 PADI6Q6TGC4 694 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 HSCBQ8IWL3 235 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 ASAP3Q8TDY4 903 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 P2RX5Q93086 422 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 MRPL38Q96DV4 380 aaKnown RBP22.43■■□□□ 1.18
HLA-B-256ENST00000639848 AK8Q96MA6 479 aa22.43■■□□□ 1.18
HLA-B-256ENST00000639848 POLR3FQ9H1D9 316 aaPredicted RBP22.43■■□□□ 1.18
HLA-B-256ENST00000639848 DDX19AQ9NUU7 478 aaKnown RBP22.43■■□□□ 1.18
HLA-B-256ENST00000639848 TBKBP1A7MCY6 615 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 FGFR1P11362 822 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 GLRA2P23416 452 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 GATMP50440 423 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 HYIQ5T013 277 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 PPM1EQ8WY54 764 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 MMTAG2Q9BU76 263 aaKnown RBP22.42■■□□□ 1.18
HLA-B-256ENST00000639848 BHMT2Q9H2M3 363 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 DNM3Q9UQ16 869 aa22.42■■□□□ 1.18
HLA-B-256ENST00000639848 VWA3AA6NCI4 1184 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 PP2D1A8MPX8 630 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 SLC26A4O43511 780 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 ZNF623O75123 536 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 ERLIN2O94905 339 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 EYA4O95677 639 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 ATF7P17544 494 aaPredicted RBP22.41■■□□□ 1.18
HLA-B-256ENST00000639848 AXLP30530 894 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 ABI1Q8IZP0 508 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 MICALL1Q8N3F8 863 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 LMAN2LQ9H0V9 348 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 FAM105AQ9NUU6 356 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 RNF19AQ9NV58 838 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 COL4A4P53420 1690 aaPredicted RBP22.41■■□□□ 1.18
HLA-B-256ENST00000639848 PRUNE2Q8WUY3 3088 aa22.41■■□□□ 1.18
HLA-B-256ENST00000639848 PDIA4P13667 645 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms