RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 CCDC43Q96MW1 224 aaKnown RBP13.55□□□□□ -0.24
EFHC1-239ENST00000638140 RAB34Q9BZG1 259 aa13.55□□□□□ -0.24
EFHC1-239ENST00000638140 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
EFHC1-239ENST00000638140 KIAA1024Q9UPX6 916 aa13.55□□□□□ -0.24
EFHC1-239ENST00000638140 TRANK1O15050 2925 aa13.55□□□□□ -0.24
EFHC1-239ENST00000638140 LPXNO60711 386 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
EFHC1-239ENST00000638140 MUTP22033 750 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 ARL2P36404 184 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 GATMP50440 423 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 MXD4Q14582 209 aaPredicted RBP13.54□□□□□ -0.24
EFHC1-239ENST00000638140 PAN2Q504Q3 1202 aaKnown RBP13.54□□□□□ -0.24
EFHC1-239ENST00000638140 EPC2Q52LR7 807 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 HAUS3Q68CZ6 603 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 BRAPQ7Z569 592 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 TMEM192Q8IY95 271 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 SNX29Q8TEQ0 813 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 MMTAG2Q9BU76 263 aaKnown RBP13.54□□□□□ -0.24
EFHC1-239ENST00000638140 MINDY3Q9H8M7 445 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 RC3H2Q9HBD1 1191 aaKnown RBP13.54□□□□□ -0.24
EFHC1-239ENST00000638140 ATP6V0A4Q9HBG4 840 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 MTCH2Q9Y6C9 303 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 LOXHD1Q8IVV2 1947 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 MYO9BQ13459 2157 aa13.54□□□□□ -0.24
EFHC1-239ENST00000638140 A0A0U1RQF3 1178 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 VWA3AA6NCI4 1184 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 LINC00271P0C7V0 271 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 FGFR1P11362 822 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 POU3F3P20264 500 aaPredicted RBP13.53□□□□□ -0.24
EFHC1-239ENST00000638140 SFPQP23246 707 aaKnown RBP eCLIP13.53□□□□□ -0.24
EFHC1-239ENST00000638140 BMPR1AP36894 532 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 CATSPER4Q7RTX7 472 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 SRGAP1Q7Z6B7 1085 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 ECHDC2Q86YB7 292 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 ASAP3Q8TDY4 903 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 GDPD5Q8WTR4 605 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
EFHC1-239ENST00000638140 POLD4Q9HCU8 107 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 GPRC5CQ9NQ84 441 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 CHST12Q9NRB3 414 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
EFHC1-239ENST00000638140 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 REV3LO60673 3130 aa13.53□□□□□ -0.24
EFHC1-239ENST00000638140 TTC3P53804 2025 aa13.52□□□□□ -0.24
EFHC1-239ENST00000638140 ARHGEF35A5YM69 484 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
EFHC1-239ENST00000638140 CYP11B2P19099 503 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 GLRA2P23416 452 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 POU5F1BQ06416 359 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
EFHC1-239ENST00000638140 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
EFHC1-239ENST00000638140 ARL6IP4Q66PJ3 421 aaKnown RBP13.52□□□□□ -0.25
EFHC1-239ENST00000638140 PADI6Q6TGC4 694 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 HSCBQ8IWL3 235 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 CMTR2Q8IYT2 770 aaKnown RBP13.52□□□□□ -0.25
EFHC1-239ENST00000638140 RNF169Q8NCN4 708 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 CLP1Q92989 425 aaKnown RBP13.52□□□□□ -0.25
EFHC1-239ENST00000638140 SAMD11Q96NU1 681 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 BHMT2Q9H2M3 363 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 DACT1Q9NYF0 836 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 DNM3Q9UQ16 869 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 MTMR6Q9Y217 621 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 PIN4Q9Y237 131 aaKnown RBP13.52□□□□□ -0.25
EFHC1-239ENST00000638140 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
EFHC1-239ENST00000638140 TBKBP1A7MCY6 615 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 E9PMD0 336 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 H3BNC9 293 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 STX6O43752 255 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 EOMESO95936 686 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
EFHC1-239ENST00000638140 CTNNB1P35222 781 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 PHKA2P46019 1235 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 PTENP60484 403 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 RESTQ13127 1097 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 GPM6BQ13491 265 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 CAPSQ13938 189 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 TFDP1Q14186 410 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 TWF2Q6IBS0 349 aaKnown RBP13.51□□□□□ -0.25
EFHC1-239ENST00000638140 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 MCPH1Q8NEM0 835 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 PLIN2Q99541 437 aa13.51□□□□□ -0.25
EFHC1-239ENST00000638140 POLR3FQ9H1D9 316 aaPredicted RBP13.51□□□□□ -0.25
EFHC1-239ENST00000638140 MRPL42Q9Y6G3 142 aaKnown RBP13.51□□□□□ -0.25
EFHC1-239ENST00000638140 C5orf67F2Z3F1 127 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 INO80B-WBP1J3KQ70 363 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 RB1P06400 928 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
EFHC1-239ENST00000638140 CEBPZQ03701 1054 aaKnown RBP13.5□□□□□ -0.25
EFHC1-239ENST00000638140 KCNK18Q7Z418 384 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 ZNF598Q86UK7 904 aaKnown RBP13.5□□□□□ -0.25
EFHC1-239ENST00000638140 CASD1Q96PB1 797 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 TRAIPQ9BWF2 469 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 PRDM6Q9NQX0 595 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms