RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 CENPXA8MT69 81 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 URB1O60287 2271 aaKnown RBP16.02■□□□□ 0.16
UBE3A-227ENST00000638011 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
UBE3A-227ENST00000638011 FAM102BQ5T8I3 360 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 USP28Q96RU2 1077 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 SMAPO00193 183 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 BRAFP15056 766 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 TUBA4AP68366 448 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 AGBL2Q5U5Z8 902 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 ARHGAP22Q7Z5H3 698 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 IL17RAQ96F46 866 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 KNL1Q8NG31 2342 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 SLC4A1P02730 911 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 MYBL1P10243 752 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 ATP5JP18859 108 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 KRT73Q86Y46 540 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 ZBED2Q9BTP6 218 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 GTSE1Q9NYZ3 720 aa16.02■□□□□ 0.16
UBE3A-227ENST00000638011 POLGP54098 1239 aaPredicted RBP16.02■□□□□ 0.15
UBE3A-227ENST00000638011 ARMCX2Q7L311 632 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 NME9Q86XW9 330 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 MICALL2Q8IY33 904 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 WDR70Q9NW82 654 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 KLHL20Q9Y2M5 609 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 SYNMO15061 1565 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 MOCS3O95396 460 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 MDH1P40925 334 aaKnown RBP16.02■□□□□ 0.15
UBE3A-227ENST00000638011 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.15
UBE3A-227ENST00000638011 SAYSD1Q9NPB0 183 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 NRBP1Q9UHY1 535 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 RGS20O76081 388 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 AP1S2P56377 157 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 SLC7A5Q01650 507 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.15
UBE3A-227ENST00000638011 EFHBQ8N7U6 833 aa16.02■□□□□ 0.15
UBE3A-227ENST00000638011 CDK13Q14004 1512 aaKnown RBP16.02■□□□□ 0.15
UBE3A-227ENST00000638011 H2AFYO75367 372 aaKnown RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 SOX5P35711 763 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 RECQLP46063 649 aaPredicted RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 RNF217Q8TC41 542 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 ABHD10Q9NUJ1 306 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 WASHC5Q12768 1159 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 TRIM72Q6ZMU5 477 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 FAM47EQ6ZV65 393 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 AURKCQ9UQB9 309 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 SNAP25P60880 206 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 KRCC1Q9NPI7 259 aaPredicted RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 MRPL11Q9Y3B7 192 aaKnown RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 MFN1Q8IWA4 741 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 DCLRE1BQ9H816 532 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 TCP11X1B4DZS4 312 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 C19orf18Q8NEA5 215 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 TEKT3Q9BXF9 490 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 RANBP17Q9H2T7 1088 aaKnown RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 ENOPH1Q9UHY7 261 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 PKN2Q16513 984 aaKnown RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 ODR4Q5SWX8 454 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 TTC33Q6PID6 262 aaPredicted RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 DLGAP2Q9P1A6 1054 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 ALBP02768 609 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 EIF4A3P38919 411 aaKnown RBP16.01■□□□□ 0.15
UBE3A-227ENST00000638011 EPHB1P54762 984 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 LPIN2Q92539 896 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 CDHR1Q96JP9 859 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 DCTN4Q9UJW0 460 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
UBE3A-227ENST00000638011 TSTA3Q13630 321 aaPredicted RBP16■□□□□ 0.15
UBE3A-227ENST00000638011 FAM160B1Q5W0V3 765 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 RIN3Q8TB24 985 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 BBS2Q9BXC9 721 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 CARD9Q9H257 536 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 USE1Q9NZ43 259 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 TNPO2O14787 897 aaKnown RBP16■□□□□ 0.15
UBE3A-227ENST00000638011 TECP42680 631 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
UBE3A-227ENST00000638011 MICU2Q8IYU8 434 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 KCNV2Q8TDN2 545 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 MTERF3Q96E29 417 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 DDX56Q9NY93 547 aaKnown RBP16■□□□□ 0.15
UBE3A-227ENST00000638011 CEP72Q9P209 647 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 TFDP2Q14188 446 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 AHI1Q8N157 1196 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 OTULINQ96BN8 352 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 ULK4Q96C45 1275 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 RGL1Q9NZL6 768 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 FCGR1AP12314 374 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 EFL1Q7Z2Z2 1120 aaKnown RBP16■□□□□ 0.15
UBE3A-227ENST00000638011 FAM47DPA6NHR8 397 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 LSP1P33241 339 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 FGD2Q7Z6J4 655 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 PARD3BQ8TEW8 1205 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 VPS50Q96JG6 964 aa16■□□□□ 0.15
UBE3A-227ENST00000638011 NIP7Q9Y221 180 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms