RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 DRC3Q9H069 523 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 ADNPQ9H2P0 1102 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 DPCR1Q3MIW9 517 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 RAET1EQ8TD07 263 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 PYROXD1Q8WU10 500 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 KIAA0556O60303 1618 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 PATL1Q86TB9 770 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 AIPL1Q9NZN9 384 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 PNMA3Q9UL41 463 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 BTKQ06187 659 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 ELMSAN1Q6PJG2 1045 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 BTNL9Q6UXG8 535 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 FARP1Q9Y4F1 1045 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 PCDHB6Q9Y5E3 794 aa18.11■□□□□ 0.49
CACNA1A-253ENST00000637927 NMT2O60551 498 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 GH2P01242 217 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 CASP1P29466 404 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 KHDRBS2Q5VWX1 349 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 SPATS2Q86XZ4 545 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 C2orf69Q8N8R5 385 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 P2RX5Q93086 422 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 DCTN4Q9UJW0 460 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 ZNF229Q9UJW7 825 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 MED7O43513 233 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 KCNA2P16389 499 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 AGAP3Q96P47 875 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 ADD2P35612 726 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 CDK8P49336 464 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 LSG1Q9H089 658 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 MED4Q9NPJ6 270 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 SUN2Q9UH99 717 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 SH3BP5LQ7L8J4 393 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 TSC22D2O75157 780 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 ESRRAP11474 423 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 AKT1P31749 480 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 CIAPIN1Q6FI81 312 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 OR6P1Q8NGX9 317 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 SEL1LQ9UBV2 794 aa18.1■□□□□ 0.49
CACNA1A-253ENST00000637927 MAN1A2O60476 641 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 DDX42Q86XP3 938 aaKnown RBP eCLIP18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 NRBF2Q96F24 287 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 ZSWIM5Q9P217 1185 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 SEMA3EO15041 775 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 TMCC1O94876 653 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 PRKCQQ04759 706 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 MRPL28Q13084 256 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 CCDC51Q96ER9 411 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 TDRD3Q9H7E2 651 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 ZNF445P59923 1031 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 SLC10A5Q5PT55 438 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 IQCDQ96DY2 449 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 SAYSD1Q9NPB0 183 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 GJB4Q9NTQ9 266 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 SERPINB13Q9UIV8 391 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 ZNF233A6NK53 670 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 EFCAB14O75071 495 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 SUN1O94901 812 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 DONSONQ9NYP3 566 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 GGT7Q9UJ14 662 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 WDR17Q8IZU2 1322 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 SUSD4Q5VX71 490 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 KRT77Q7Z794 578 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 FBXO41Q8TF61 875 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 NHEJ1Q9H9Q4 299 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 ZHX2Q9Y6X8 837 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 TAC1P20366 129 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 TMPRSS15P98073 1019 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 IL1RL2Q9HB29 575 aa18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 PIH1D3Q9NQM4 214 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 MRPL42Q9Y6G3 142 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-253ENST00000637927 KIAA2013Q8IYS2 634 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 EFHD1Q9BUP0 239 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 USP17L5A8MUK1 530 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 SKIP12755 728 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 WEE1P30291 646 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 MLH1P40692 756 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 GYS2P54840 703 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 TTC23LQ6PF05 361 aa18.08■□□□□ 0.49
CACNA1A-253ENST00000637927 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 KRT7P08729 469 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 MMP10P09238 476 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 ETFBP38117 255 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 OTUD5Q96G74 571 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 PACSIN2Q9UNF0 486 aaPredicted RBP18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 NOVA2Q9UNW9 492 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 KIF21AQ7Z4S6 1674 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 CACUL1Q86Y37 369 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 LEMD2Q8NC56 503 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 SLC24A3Q9HC58 644 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 TADA3O75528 432 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 ECEL1O95672 775 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 GALNT17Q6IS24 598 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 ERICH1Q86X53 443 aa18.08■□□□□ 0.48
CACNA1A-253ENST00000637927 ATP10AO60312 1499 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 LRRC36Q1X8D7 754 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 ANKS3Q6ZW76 656 aa18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 SLC44A2Q8IWA5 706 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-253ENST00000637927 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms