RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 PLA2G6O60733 806 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 AOC2O75106 756 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SMNDC1O75940 238 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CHGBP05060 677 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SCG5P05408 212 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 HOXD8P13378 290 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 KRT13P13646 458 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 P4HA1P13674 534 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 HNRNPLP14866 589 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PORP16435 677 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CD86P42081 329 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 IL12RB1P42701 662 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CTSOP43234 321 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 MTNR1BP49286 362 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 MCM2P49736 904 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 RNF144AP50876 292 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SLC12A2P55011 1212 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SH3BGRP55822 239 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 HNRNPUQ00839 825 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 AKAP17AQ02040 695 aaKnown RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 POU4F2Q12837 409 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 LRMPQ12912 555 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 NNTQ13423 1086 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 TMED1Q13445 227 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PTK2BQ14289 1009 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 TNIP1Q15025 636 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SNX17Q15036 470 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 INF2Q27J81 1249 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SETMARQ53H47 684 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 HSP90AB3PQ58FF7 597 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 KAZNQ674X7 775 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 GPR139Q6DWJ6 353 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 LBX2Q6XYB7 198 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 KIAA1211Q6ZU35 1233 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 FRMD7Q6ZUT3 714 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 ZNF765Q7L2R6 523 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CYFIP1Q7L576 1253 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 GALNT7Q86SF2 657 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CHD1LQ86WJ1 897 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SIAH1Q8IUQ4 282 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SIRT2Q8IXJ6 389 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC170Q8IYT3 715 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 TRMT2AQ8IZ69 625 aaKnown RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 MARCH10Q8NA82 808 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PCDH19Q8TAB3 1148 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 KLHDC4Q8TBB5 520 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SPATA18Q8TC71 538 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 TAF4BQ92750 862 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 RILPL2Q969X0 211 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 C18orf8Q96DM3 657 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC74BQ96LY2 380 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 EYA3Q99504 573 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 POP1Q99575 1024 aaKnown RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PAIP1Q9H074 479 aaKnown RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PCIF1Q9H4Z3 704 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 ACAD9Q9H845 621 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 ARMT1Q9H993 441 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 GP6Q9HCN6 339 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 POLMQ9NP87 494 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 KCND1Q9NSA2 647 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PIH1D1Q9NWS0 290 aaKnown RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 HPF1Q9NWY4 346 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CACNA2D2Q9NY47 1150 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 POGKQ9P215 609 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 PCDHGB4Q9UN71 923 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 EDARQ9UNE0 448 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 GPR55Q9Y2T6 319 aaPredicted RBP3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 SPO11Q9Y5K1 396 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 NR2E3Q9Y5X4 410 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 CSADQ9Y600 493 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 ABCC9O60706 1549 aa3.83□□□□□ -1.8
CHRNA4-220ENST00000637628 A0A1B0GTH6 734 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC69A6NI79 296 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 H0Y626 953 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 WNT7AO00755 349 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 PHGDHO43175 533 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 AKR1B10O60218 316 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 GABBR2O75899 941 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 GOSR1O95249 250 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ZIC2O95409 532 aaPredicted RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 SGPL1O95470 568 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 GUCA1CO95843 209 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC159P0C7I6 412 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ZNF865P0CJ78 1059 aaPredicted RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ESRRAP11474 423 aaPredicted RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 BRAFP15056 766 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ENPP1P22413 925 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CTSSP25774 331 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 HSPA4P34932 840 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 HOXD13P35453 343 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 MSH2P43246 934 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 AFF3P51826 1226 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 LIMK1P53667 647 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 KCNQ4P56696 695 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 POLR2FP61218 127 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 SMAD3P84022 425 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 AMPD2Q01433 879 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms