RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 POTEMA6NI47 508 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 ZBTB39O15060 712 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 HOXA2O43364 376 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 SRGAP2CP0DJJ0 459 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 EMC2Q15006 297 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 MCTP1Q6DN14 999 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 CATSPER4Q7RTX7 472 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 ABI1Q8IZP0 508 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 RNF169Q8NCN4 708 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 PRPF31Q8WWY3 499 aaKnown RBP15.4■□□□□ 0.06
PNKP-228ENST00000637325 LMAN2LQ9H0V9 348 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 CHST12Q9NRB3 414 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 ANKEF1Q9NU02 776 aa15.4■□□□□ 0.06
PNKP-228ENST00000637325 H3BQV1 296 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 GRM6O15303 877 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 ASAP2O43150 1006 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 CSPG5O95196 566 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 LYPLA2O95372 231 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 LINC00271P0C7V0 271 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 FGFR1P11362 822 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 TFF2Q03403 129 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 LAMTOR4Q0VGL1 99 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 TWF2Q6IBS0 349 aaKnown RBP15.39■□□□□ 0.05
PNKP-228ENST00000637325 ECHDC2Q86YB7 292 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 NSUN3Q9H649 340 aaKnown RBP15.39■□□□□ 0.05
PNKP-228ENST00000637325 TUFT1Q9NNX1 390 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 ALG13Q9NP73 1137 aaKnown RBP15.39■□□□□ 0.05
PNKP-228ENST00000637325 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 PCDHB12Q9Y5F1 795 aa15.39■□□□□ 0.05
PNKP-228ENST00000637325 DGAT1O75907 488 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 CD2BP2O95400 341 aaKnown RBP15.38■□□□□ 0.05
PNKP-228ENST00000637325 EOMESO95936 686 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 XRCC6P12956 609 aaKnown RBP eCLIP15.38■□□□□ 0.05
PNKP-228ENST00000637325 U2AF2P26368 475 aaKnown RBP eCLIP15.38■□□□□ 0.05
PNKP-228ENST00000637325 GJB2P29033 226 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 SRGAP1Q7Z6B7 1085 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 FERMT3Q86UX7 667 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 PIGOQ8TEQ8 1089 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 P2RX5Q93086 422 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 TMEM117Q9H0C3 514 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 PLAGL2Q9UPG8 496 aa15.38■□□□□ 0.05
PNKP-228ENST00000637325 PIN4Q9Y237 131 aaKnown RBP15.38■□□□□ 0.05
PNKP-228ENST00000637325 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.38■□□□□ 0.05
PNKP-228ENST00000637325 MYH11P35749 1972 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 A0A087WWV3 80 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 A0A0U1RQF3 1178 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 SKIP12755 728 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 TFDP1Q14186 410 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 MXD4Q14582 209 aaPredicted RBP15.37■□□□□ 0.05
PNKP-228ENST00000637325 NBR1Q14596 966 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 TCEAL5Q5H9L2 206 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 EP400NLQ6ZTU2 488 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 KLHL23Q8NBE8 558 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 RNF149Q8NC42 400 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 NACC1Q96RE7 527 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
PNKP-228ENST00000637325 IFT122Q9HBG6 1241 aa15.37■□□□□ 0.05
PNKP-228ENST00000637325 TYW1Q9NV66 732 aaKnown RBP15.37■□□□□ 0.05
PNKP-228ENST00000637325 SPTBN5Q9NRC6 3674 aaKnown RBP15.37■□□□□ 0.05
PNKP-228ENST00000637325 VCANP13611 3396 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 MED24O75448 989 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 ITGB1P05556 798 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 SPATA31C1P0DKV0 1188 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 LAG3P18627 525 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 PHKA2P46019 1235 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 RARRES1P49788 294 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 CSPP1Q1MSJ5 1256 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 HAUS3Q68CZ6 603 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 CATSPER3Q86XQ3 398 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 THNSL1Q8IYQ7 743 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 ADAMTS19Q8TE59 1207 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 CASD1Q96PB1 797 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 RAB34Q9BZG1 259 aa15.36■□□□□ 0.05
PNKP-228ENST00000637325 UBE2ZQ9H832 354 aaPredicted RBP15.36■□□□□ 0.05
PNKP-228ENST00000637325 USO1O60763 962 aaKnown RBP15.35■□□□□ 0.05
PNKP-228ENST00000637325 ERLIN2O94905 339 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 RPA1P27694 616 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 CCT6AP40227 531 aaKnown RBP15.35■□□□□ 0.05
PNKP-228ENST00000637325 TOB1P50616 345 aaPredicted RBP15.35■□□□□ 0.05
PNKP-228ENST00000637325 KCNQ1P51787 676 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 NCBP1Q09161 790 aaKnown RBP15.35■□□□□ 0.05
PNKP-228ENST00000637325 PTGDRQ13258 359 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 MAEAQ7L5Y9 396 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 LRRC43Q8N309 656 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 COLGALT1Q8NBJ5 622 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 SPPL3Q8TCT6 385 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 POF1BQ8WVV4 589 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 PPP2R3CQ969Q6 453 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 XPNPEP1Q9NQW7 623 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 AGPAT5Q9NUQ2 364 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 FAM105AQ9NUU6 356 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 LRWD1Q9UFC0 647 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 PCDHB6Q9Y5E3 794 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 STK24Q9Y6E0 443 aa15.35■□□□□ 0.05
PNKP-228ENST00000637325 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
PNKP-228ENST00000637325 ARHGEF35A5YM69 484 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 INO80B-WBP1J3KQ70 363 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms