RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 FSCN1Q16658 493 aaKnown RBP23.17■■□□□ 1.3
CLN8-213ENST00000637156 PTPN21Q16825 1174 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 EFCAB12Q6NXP0 572 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 FILIP1Q7Z7B0 1213 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 RAET1EQ8TD07 263 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 CNOT6LQ96LI5 555 aaKnown RBP23.17■■□□□ 1.3
CLN8-213ENST00000637156 GBP3Q9H0R5 595 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 VPS16Q9H269 839 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 ARHGAP28Q9P2N2 729 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 TBX20Q9UMR3 447 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 DENND3A2RUS2 1198 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 TEX33O43247 280 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 C22orf31O95567 290 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 HSPA6P17066 643 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 PXYLP1Q8TE99 480 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 CEP63Q96MT8 703 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 ACCSQ96QU6 501 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 TMEM206Q9H813 350 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 RTN4Q9NQC3 1192 aaKnown RBP23.17■■□□□ 1.3
CLN8-213ENST00000637156 TAB2Q9NYJ8 693 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 MAGEC2Q9UBF1 373 aaPredicted RBP23.17■■□□□ 1.3
CLN8-213ENST00000637156 KCNG1Q9UIX4 513 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 THSD7BQ9C0I4 1608 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 MYH11P35749 1972 aa23.17■■□□□ 1.3
CLN8-213ENST00000637156 MYADML2A6NDP7 307 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 GAS2O43903 313 aaKnown RBP23.16■■□□□ 1.3
CLN8-213ENST00000637156 NR2F2P24468 414 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 COPB1P53618 953 aaKnown RBP23.16■■□□□ 1.3
CLN8-213ENST00000637156 GJA9P57773 515 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 MAP2K1Q02750 393 aaPredicted RBP23.16■■□□□ 1.3
CLN8-213ENST00000637156 BRDTQ58F21 947 aaPredicted RBP23.16■■□□□ 1.3
CLN8-213ENST00000637156 MARCH8Q5T0T0 291 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 MAP3K21Q5TCX8 1036 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 FAM114A1Q8IWE2 563 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 DRC7Q8IY82 874 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 SYCP3Q8IZU3 236 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 JPH2Q9BR39 696 aaPredicted RBP23.16■■□□□ 1.3
CLN8-213ENST00000637156 TUBGCP2Q9BSJ2 902 aa23.16■■□□□ 1.3
CLN8-213ENST00000637156 CETN3O15182 167 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 PGK1P00558 417 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 NR3C1P04150 777 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 NAMPTP43490 491 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 KIAA0753Q2KHM9 967 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 ANKRD20A12PQ8NF67 263 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 TCP11Q8WWU5 503 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 AGPAT3Q9NRZ7 376 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 HMGCRP04035 888 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 C6orf222P0C671 652 aaPredicted RBP23.15■■□□□ 1.3
CLN8-213ENST00000637156 CAPSQ13938 189 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 NFIL3Q16649 462 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 TAS1R3Q7RTX0 852 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 METTL13Q8N6R0 699 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 DMAC2Q9NW81 257 aa23.15■■□□□ 1.3
CLN8-213ENST00000637156 SUCLA2Q9P2R7 463 aaPredicted RBP23.15■■□□□ 1.3
CLN8-213ENST00000637156 TISP43B9A030 160 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 HAS3O00219 553 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 N4BP3O15049 544 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 GJB1P08034 283 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 MYL3P08590 195 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 LAMTOR4Q0VGL1 99 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 PPFIA1Q13136 1202 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 PPP2R5AQ15172 486 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 GRIK4Q16099 956 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 GNASQ5JWF2 1037 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 MTHFD1LQ6UB35 978 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 MAP4K3Q8IVH8 894 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 PPP1R13LQ8WUF5 828 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 KCNN1Q92952 543 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 SETD4Q9NVD3 440 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 DNAH12Q6ZR08 3092 aa23.14■■□□□ 1.29
CLN8-213ENST00000637156 COL1A2P08123 1366 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 MAGEB2O15479 319 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 RARBP10826 455 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 RPL13P26373 211 aaKnown RBP23.13■■□□□ 1.29
CLN8-213ENST00000637156 CLCN3P51790 818 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 CHMP4BP1P59074 171 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 NKX3-2P78367 333 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 PURAQ00577 322 aaKnown RBP23.13■■□□□ 1.29
CLN8-213ENST00000637156 MXD4Q14582 209 aaPredicted RBP23.13■■□□□ 1.29
CLN8-213ENST00000637156 ARHGEF6Q15052 776 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 FILIP1LQ4L180 1135 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 HS2ST1Q7LGA3 356 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 LINC01465Q8N7H1 131 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 PSPC1Q8WXF1 523 aaKnown RBP23.13■■□□□ 1.29
CLN8-213ENST00000637156 UPF3AQ9H1J1 476 aaKnown RBP23.13■■□□□ 1.29
CLN8-213ENST00000637156 LRRIQ4A6NIV6 560 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 AKAP3O75969 853 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 TPM3P06753 285 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 CASP4P49662 377 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 MFSD10Q14728 455 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 MIIPQ5JXC2 388 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 VSTM4Q8IW00 320 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 RETREG2Q8NC44 543 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 HVCN1Q96D96 273 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 BEGAINQ9BUH8 593 aa23.13■■□□□ 1.29
CLN8-213ENST00000637156 CASP8AP2Q9UKL3 1982 aa23.12■■□□□ 1.29
CLN8-213ENST00000637156 GNA14O95837 355 aa23.12■■□□□ 1.29
CLN8-213ENST00000637156 SRGAP2CP0DJJ0 459 aa23.12■■□□□ 1.29
CLN8-213ENST00000637156 PRKCSHP14314 528 aaPredicted RBP23.12■■□□□ 1.29
CLN8-213ENST00000637156 MTIF2P46199 727 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms