RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 PSMC5P62195 406 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 CDC42EP1Q00587 391 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 PLCB3Q01970 1234 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 COASYQ13057 564 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 SMAD4Q13485 552 aaKnown RBP8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 ANKRD1Q15327 319 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 CLUL1Q15846 466 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 MTERF2Q49AM1 385 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 CLLU1OSQ5K130 101 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 ERICH6BQ5W0A0 696 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 NEK8Q86SG6 692 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 ECHDC2Q86YB7 292 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 ZNF579Q8NAF0 562 aaKnown RBP8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 NLRP7Q8WX94 980 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 GTF3C6Q969F1 213 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 PPP2R3CQ969Q6 453 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 FDXACB1Q9BRP7 624 aaPredicted RBP8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 TMEM117Q9H0C3 514 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 AAASQ9NRG9 546 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 WRAP73Q9P2S5 460 aaPredicted RBP8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 CD207Q9UJ71 328 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 FAM50BQ9Y247 325 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 LZTS1Q9Y250 596 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 CACNA1HO95180 2353 aa8.22□□□□□ -1.09
CACNA1A-222ENST00000636022 FAM86C2PA6NEL3 165 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 FAM205CA6NFA0 338 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 HOXA2O43364 376 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 CCNT1O60563 726 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 LARGE1O95461 756 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 EOMESO95936 686 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 ZSCAN20P17040 1043 aaPredicted RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 XBP1P17861 261 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 LAG3P18627 525 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 SSTR3P32745 418 aaPredicted RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 QARSP47897 775 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 NDUFV1P49821 464 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 DNM2P50570 870 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 NPEPPSP55786 919 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 SPIRE1Q08AE8 756 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 NR5A1Q13285 461 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 KCNC3Q14003 757 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 ME3Q16798 604 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 CSPP1Q1MSJ5 1256 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 TMEM31Q5JXX7 168 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 SPOUT1Q5T280 376 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 PLA2G4FQ68DD2 849 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 PIK3AP1Q6ZUJ8 805 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 RBM23Q86U06 439 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 KSR1Q8IVT5 923 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 THNSL1Q8IYQ7 743 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 NECAB1Q8N987 351 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 SMRP1Q8NCR6 262 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 VN1R2Q8NFZ6 395 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 WASF1Q92558 559 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 GCOM2Q9BZD3 368 aaPredicted RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 CYP26B1Q9NR63 512 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 TLR9Q9NR96 1032 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 CHST12Q9NRB3 414 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 SUCLA2Q9P2R7 463 aaPredicted RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 ORC3Q9UBD5 711 aaPredicted RBP8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 VPS13AQ96RL7 3174 aa8.21□□□□□ -1.1
CACNA1A-222ENST00000636022 ARID2Q68CP9 1835 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 PER2O15055 1255 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 GABBR2O75899 941 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 SEC24BO95487 1268 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 P4HBP07237 508 aaKnown RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 ALADP13716 330 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 PBX3P40426 434 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 PHKA2P46019 1235 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 RBM10P98175 930 aaKnown RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 EPHA7Q15375 998 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 DUSP6Q16828 381 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 PDE12Q6L8Q7 609 aaKnown RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 KCNT2Q6UVM3 1135 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 ZNF410Q86VK4 478 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 RHPN2Q8IUC4 686 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 LRRC43Q8N309 656 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 RNF169Q8NCN4 708 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 NSUN7Q8NE18 718 aaKnown RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 HELQQ8TDG4 1101 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 MRPS27Q92552 414 aaKnown RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 SCLT1Q96NL6 688 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 CDCA3Q99618 268 aaPredicted RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 NAP1L4Q99733 375 aaKnown RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 JPH2Q9BR39 696 aaPredicted RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 DHX33Q9H6R0 707 aaKnown RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 TLE6Q9H808 572 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 IFT122Q9HBG6 1241 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 DACT1Q9NYF0 836 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 BARX2Q9UMQ3 279 aaPredicted RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 ARIH1Q9Y4X5 557 aaPredicted RBP8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 PPME1Q9Y570 386 aa8.2□□□□□ -1.1
CACNA1A-222ENST00000636022 MEIS3P2A8K0S8 358 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 HIDE1A8MVS5 230 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 WNT7AO00755 349 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 ZBTB39O15060 712 aa8.19□□□□□ -1.1
CACNA1A-222ENST00000636022 DCXO43602 365 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms