RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 ACTN1P12814 892 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 CAPSQ13938 189 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 IFNLR1Q8IU57 520 aaPredicted RBP21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 PDILTQ8N807 584 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 RNF149Q8NC42 400 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 BSNDQ8WZ55 320 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 KIFAP3Q92845 792 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 TIPINQ9BVW5 301 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 GCOM2Q9BZD3 368 aaPredicted RBP21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 POLD4Q9HCU8 107 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 MICAL3Q7RTP6 2002 aa21.51■■□□□ 1.03
CROCCP4-202ENST00000633627 ABHD14A-ACY1A0A1B0GW23 586 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 SRGAP2CP0DJJ0 459 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 STAT6P42226 847 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 PTENP60484 403 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 PAK2Q13177 524 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 IKBKEQ14164 716 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 FAM43BQ6ZT52 329 aaPredicted RBP21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 GPBP1Q86WP2 473 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 RNPC3Q96LT9 517 aaKnown RBP21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 SCLT1Q96NL6 688 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 FAM13BQ9NYF5 915 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 ST3GAL5Q9UNP4 418 aa21.5■■□□□ 1.03
CROCCP4-202ENST00000633627 LAMA3Q16787 3333 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 FAM237AA0A1B0GTK4 181 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 A0A1W2PQ27 194 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 A0A1W2PQ64 194 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 A0A1W2PQD8 194 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 GPR182O15218 404 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 HIP1RO75146 1068 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 CSDE1O75534 798 aaKnown RBP21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 TFDP1Q14186 410 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 DHX8Q14562 1220 aaKnown RBP21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 SRGAP1Q7Z6B7 1085 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 NFKBIZQ9BYH8 718 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 INO80BQ9C086 356 aaPredicted RBP21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 TMX1Q9H3N1 280 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 MINDY3Q9H8M7 445 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 HPSEQ9Y251 543 aa21.49■■□□□ 1.03
CROCCP4-202ENST00000633627 NPHP3-ACAD11A0A0J9YXS1 232 aa21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 EFCAB14O75071 495 aa21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 PHKA2P46019 1235 aa21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 NFX1Q12986 1120 aaKnown RBP21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 ODR4Q5SWX8 454 aa21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 RTN4RL1Q86UN2 441 aaPredicted RBP21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 IQUBQ8NA54 791 aa21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 MTIF3Q9H2K0 278 aaKnown RBP21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 KCNH3Q9ULD8 1083 aa21.48■■□□□ 1.03
CROCCP4-202ENST00000633627 A0A1B0GVL5 298 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 POLR2DO15514 142 aaKnown RBP21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 PFKFB1P16118 471 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 FGFR4P22455 802 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 NAMPTP43490 491 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 WDR5P61964 334 aaKnown RBP21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 RAD51AP2Q09MP3 1159 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 PPP2R5AQ15172 486 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 SV2BQ7L1I2 683 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 LINC01599Q8WXQ3 324 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 DHX58Q96C10 678 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 DRC1Q96MC2 740 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 REEP2Q9BRK0 252 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 FTHL17Q9BXU8 183 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 CUEDC2Q9H467 287 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 C17orf75Q9HAS0 396 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 KBTBD4Q9NVX7 518 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 ODF2LQ9ULJ1 636 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 LAMA2P24043 3122 aaKnown RBP21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 MYH11P35749 1972 aa21.47■■□□□ 1.03
CROCCP4-202ENST00000633627 MYMKA6NI61 221 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 SFI1A8K8P3 1242 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 ZBBXA8MT70 800 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 ENPP3O14638 875 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 MGEA5O60502 916 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 GIT2Q14161 759 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 DSC3Q14574 896 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 CDCA2Q69YH5 1023 aaPredicted RBP21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 IFT74Q96LB3 600 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 SLC4A7Q9Y6M7 1214 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 TTC3P53804 2025 aa21.46■■□□□ 1.03
CROCCP4-202ENST00000633627 PTPRSQ13332 1948 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 LRRIQ4A6NIV6 560 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 SFPQP23246 707 aaKnown RBP eCLIP21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 NPTX2P47972 431 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 ZNF131P52739 623 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 CACNB1Q02641 598 aaPredicted RBP21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 MBTD1Q05BQ5 628 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 LRIT3Q3SXY7 679 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 DNAJC19Q96DA6 116 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 PYM1Q9BRP8 204 aaKnown RBP21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 NTPCRQ9BSD7 190 aaKnown RBP21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 TSPYL2Q9H2G4 693 aaPredicted RBP21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 ADGRA3Q8IWK6 1321 aa21.45■■□□□ 1.02
CROCCP4-202ENST00000633627 PLS3P13797 630 aa21.44■■□□□ 1.02
CROCCP4-202ENST00000633627 NDUFA8P51970 172 aa21.44■■□□□ 1.02
CROCCP4-202ENST00000633627 PEX3P56589 373 aa21.44■■□□□ 1.02
CROCCP4-202ENST00000633627 DEFB103AP81534 67 aa21.44■■□□□ 1.02
CROCCP4-202ENST00000633627 PCBP1Q15365 356 aaKnown RBP eCLIP21.44■■□□□ 1.02
CROCCP4-202ENST00000633627 AMHR2Q16671 573 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms