RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
VARS2-213ENST00000625423 PPATQ06203 517 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 DCAF12L1Q5VU92 463 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
VARS2-213ENST00000625423 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 ACER1Q8TDN7 264 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 DMAC2Q9NW81 257 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 APEX2Q9UBZ4 518 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 NCANO14594 1321 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 FRMPD4Q14CM0 1322 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 MYO1FO00160 1098 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 LRRN2O75325 713 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 POLR2MP0CAP2 368 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 TNFAIP3P21580 790 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 INPP5BP32019 993 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 COPB2P35606 906 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 ZNF473Q8WTR7 871 aaKnown RBP12.22□□□□□ -0.45
VARS2-213ENST00000625423 TRIM51Q9BSJ1 452 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 THAP2Q9H0W7 228 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 UNC45AQ9H3U1 944 aa12.22□□□□□ -0.45
VARS2-213ENST00000625423 PPP1R1BQ9UD71 204 aaPredicted RBP12.22□□□□□ -0.45
VARS2-213ENST00000625423 UTP11Q9Y3A2 253 aaKnown RBP12.22□□□□□ -0.45
VARS2-213ENST00000625423 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 TULP1O00294 542 aaPredicted RBP12.21□□□□□ -0.45
VARS2-213ENST00000625423 EXOC3O60645 756 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 MMP10P09238 476 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 ARP10275 920 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 ZNF131P52739 623 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 MYL7Q01449 175 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 NLRP14Q86W24 1093 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 HOOK2Q96ED9 719 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 PRMT6Q96LA8 375 aaPredicted RBP12.21□□□□□ -0.45
VARS2-213ENST00000625423 NACC1Q96RE7 527 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 CCT8L2Q96SF2 557 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 PPANQ9NQ55 473 aaKnown RBP12.21□□□□□ -0.45
VARS2-213ENST00000625423 SEL1LQ9UBV2 794 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 E7EVH7 732 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 FKBP1AP62942 108 aaKnown RBP12.21□□□□□ -0.45
VARS2-213ENST00000625423 POU5F1Q01860 360 aaKnown RBP12.21□□□□□ -0.45
VARS2-213ENST00000625423 ZNF211Q13398 564 aaPredicted RBP12.21□□□□□ -0.45
VARS2-213ENST00000625423 CEP55Q53EZ4 464 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 PHLDB3Q6NSJ2 640 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 MAEAQ7L5Y9 396 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 TMC3Q7Z5M5 1100 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 SYCP3Q8IZU3 236 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.45
VARS2-213ENST00000625423 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.21□□□□□ -0.45
VARS2-213ENST00000625423 FOXN3O00409 490 aaPredicted RBP12.21□□□□□ -0.46
VARS2-213ENST00000625423 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.46
VARS2-213ENST00000625423 BFSP1Q12934 665 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 MTMR3Q13615 1198 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 PPP2R5AQ15172 486 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 STXBP4Q6ZWJ1 553 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 MYCBPAPQ8TBZ2 947 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 SEC14L1Q92503 715 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 KAT2BQ92831 832 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 EFCC1Q9HA90 598 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 TTC7AQ9ULT0 858 aaPredicted RBP12.21□□□□□ -0.46
VARS2-213ENST00000625423 COG5Q9UP83 839 aa12.21□□□□□ -0.46
VARS2-213ENST00000625423 ODF2Q5BJF6 829 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 ARFGAP2Q8N6H7 521 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 LXNQ9BS40 222 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 FAM114A2Q9NRY5 505 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 ODF2LQ9ULJ1 636 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 ATRNL1Q5VV63 1379 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 UBE4BO95155 1302 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 DDX39AO00148 427 aaKnown RBP12.2□□□□□ -0.46
VARS2-213ENST00000625423 HIP1RO75146 1068 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 ENTPD3O75355 529 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 CCDC172P0C7W6 258 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 DLG4P78352 724 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
VARS2-213ENST00000625423 AOC3Q16853 763 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 RUFY4Q6ZNE9 571 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 PCIF1Q9H4Z3 704 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 LRRC4CQ9HCJ2 640 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 ERVK-5Q9HDB9 667 aa12.2□□□□□ -0.46
VARS2-213ENST00000625423 KIAA0754O94854 1291 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 TMOD1P28289 359 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 ZYXQ15942 572 aaKnown RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 DAW1Q8N136 415 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 SLC20A1Q8WUM9 679 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 ARHGEF10LQ9HCE6 1279 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 TMOD4Q9NZQ9 345 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 NOVA2Q9UNW9 492 aaKnown RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 ARHGEF35A5YM69 484 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 ANKRD62A6NC57 917 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 TISP43B9A030 160 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 MEFVO15553 781 aaPredicted RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 VIL1P09327 827 aaKnown RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 PTENP60484 403 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 BIRC3Q13489 604 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 AADACL2Q6P093 401 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 OTUD6BQ8N6M0 293 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 LMO3Q8TAP4 145 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 ATP8B4Q8TF62 1192 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 ALG3Q92685 438 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms