RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 IL27Q8NEV9 243 aa17.88■□□□□ 0.45
DDB2-216ENST00000622878 NEK9Q8TD19 979 aa17.88■□□□□ 0.45
DDB2-216ENST00000622878 SLC7A3Q8WY07 619 aa17.88■□□□□ 0.45
DDB2-216ENST00000622878 PABPC5Q96DU9 382 aaKnown RBP17.88■□□□□ 0.45
DDB2-216ENST00000622878 SCLT1Q96NL6 688 aa17.88■□□□□ 0.45
DDB2-216ENST00000622878 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
DDB2-216ENST00000622878 TRAIPQ9BWF2 469 aa17.88■□□□□ 0.45
DDB2-216ENST00000622878 FOXP1Q9H334 677 aaPredicted RBP17.88■□□□□ 0.45
DDB2-216ENST00000622878 CHST12Q9NRB3 414 aa17.88■□□□□ 0.45
DDB2-216ENST00000622878 TYW1Q9NV66 732 aaKnown RBP17.88■□□□□ 0.45
DDB2-216ENST00000622878 ATF7P17544 494 aaPredicted RBP17.87■□□□□ 0.45
DDB2-216ENST00000622878 POLGP54098 1239 aaPredicted RBP17.87■□□□□ 0.45
DDB2-216ENST00000622878 RABEP1Q15276 862 aa17.87■□□□□ 0.45
DDB2-216ENST00000622878 CTC1Q2NKJ3 1217 aa17.87■□□□□ 0.45
DDB2-216ENST00000622878 LRRC55Q6ZSA7 311 aa17.87■□□□□ 0.45
DDB2-216ENST00000622878 TPH2Q8IWU9 490 aa17.87■□□□□ 0.45
DDB2-216ENST00000622878 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.87■□□□□ 0.45
DDB2-216ENST00000622878 PRPF31Q8WWY3 499 aaKnown RBP17.87■□□□□ 0.45
DDB2-216ENST00000622878 TMEM143Q96AN5 459 aa17.87■□□□□ 0.45
DDB2-216ENST00000622878 TMEM117Q9H0C3 514 aa17.87■□□□□ 0.45
DDB2-216ENST00000622878 COL4A3BPQ9Y5P4 624 aa17.87■□□□□ 0.45
DDB2-216ENST00000622878 HOXA2O43364 376 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 EOMESO95936 686 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 KCNA5P22460 613 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 SFPQP23246 707 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDB2-216ENST00000622878 LTBRP36941 435 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 LAMTOR4Q0VGL1 99 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 HYAL1Q12794 435 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 ORC2Q13416 577 aaPredicted RBP17.86■□□□□ 0.45
DDB2-216ENST00000622878 EMC2Q15006 297 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 XKR9Q5GH70 373 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 CLLU1OSQ5K130 101 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 POF1BQ8WVV4 589 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 NLRP4Q96MN2 994 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 INO80BQ9C086 356 aaPredicted RBP17.86■□□□□ 0.45
DDB2-216ENST00000622878 XPNPEP1Q9NQW7 623 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 DACT1Q9NYF0 836 aa17.86■□□□□ 0.45
DDB2-216ENST00000622878 POTEMA6NI47 508 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 GAS2O43903 313 aaKnown RBP17.85■□□□□ 0.45
DDB2-216ENST00000622878 SPATA31C1P0DKV0 1188 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 ATP2B1P20020 1258 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 MCM7P33993 719 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 IRS1P35568 1242 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 PHKA2P46019 1235 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 COLGALT1Q8NBJ5 622 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 PSPC1Q8WXF1 523 aaKnown RBP17.85■□□□□ 0.45
DDB2-216ENST00000622878 MINDY3Q9H8M7 445 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 BMP2KQ9NSY1 1161 aaPredicted RBP17.85■□□□□ 0.45
DDB2-216ENST00000622878 ANKEF1Q9NU02 776 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 PCDHB12Q9Y5F1 795 aa17.85■□□□□ 0.45
DDB2-216ENST00000622878 NCK2O43639 380 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 U2AF2P26368 475 aaKnown RBP eCLIP17.84■□□□□ 0.453e-7■■□□□ 11.4
DDB2-216ENST00000622878 UBE3AQ05086 875 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 NOSTRINQ8IVI9 506 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 FAM184AQ8NB25 1140 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 TCP11Q8WWU5 503 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 AAASQ9NRG9 546 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 AGPAT5Q9NUQ2 364 aa17.84■□□□□ 0.45
DDB2-216ENST00000622878 H3BQ06 376 aaPredicted RBP17.83■□□□□ 0.44
DDB2-216ENST00000622878 ASAP2O43150 1006 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 ZNF623O75123 536 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 FGF18O76093 207 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 CD2BP2O95400 341 aaKnown RBP17.83■□□□□ 0.44
DDB2-216ENST00000622878 SRGAP2CP0DJJ0 459 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 XRCC6P12956 609 aaKnown RBP eCLIP17.83■□□□□ 0.444e-6■■■■□ 25.4
DDB2-216ENST00000622878 LAG3P18627 525 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 HOXA11P31270 313 aaPredicted RBP17.83■□□□□ 0.44
DDB2-216ENST00000622878 GTF2F1P35269 517 aaKnown RBP eCLIP17.83■□□□□ 0.44
DDB2-216ENST00000622878 TRAPPC10P48553 1259 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 RARRES1P49788 294 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 ZNF174Q15697 407 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 CSPP1Q1MSJ5 1256 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 SPOUT1Q5T280 376 aaKnown RBP17.83■□□□□ 0.44
DDB2-216ENST00000622878 CATSPER4Q7RTX7 472 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 SRGAP1Q7Z6B7 1085 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 ADGRD2Q7Z7M1 963 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 LRRC43Q8N309 656 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 C4orf32Q8N8J7 132 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 MTRQ99707 1265 aa17.83■□□□□ 0.44
DDB2-216ENST00000622878 PIN4Q9Y237 131 aaKnown RBP17.83■□□□□ 0.44
DDB2-216ENST00000622878 GRXCR2A6NFK2 248 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 MED24O75448 989 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
DDB2-216ENST00000622878 PLCB3Q01970 1234 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 DLX2Q07687 328 aaPredicted RBP17.82■□□□□ 0.44
DDB2-216ENST00000622878 CATSPER3Q86XQ3 398 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 IFNLR1Q8IU57 520 aaPredicted RBP17.82■□□□□ 0.44
DDB2-216ENST00000622878 RNF149Q8NC42 400 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 RNF169Q8NCN4 708 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 HELQQ8TDG4 1101 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 PIGOQ8TEQ8 1089 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 POLR3CQ9BUI4 534 aaPredicted RBP17.82■□□□□ 0.44
DDB2-216ENST00000622878 TUFT1Q9NNX1 390 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 FAM105AQ9NUU6 356 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 CLDND1Q9NY35 253 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 TRIOO75962 3097 aa17.82■□□□□ 0.44
DDB2-216ENST00000622878 A0A087WWV3 80 aa17.81■□□□□ 0.44
DDB2-216ENST00000622878 LINC01565O15544 149 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms