RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 XPNPEP1Q9NQW7 623 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 DNM3Q9UQ16 869 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 ADGRA3Q8IWK6 1321 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 TTC3P53804 2025 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 CEBPZQ03701 1054 aaKnown RBP15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 BTG3Q14201 252 aaPredicted RBP15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 ECM1Q16610 540 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 FOXD4L5Q5VV16 416 aaPredicted RBP15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 FAM173BQ6P4H8 233 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 SRGAP1Q7Z6B7 1085 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 FIBCD1Q8N539 461 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 RASSF8Q8NHQ8 419 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 FOXD4L4Q8WXT5 416 aaPredicted RBP15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 BHMT2Q9H2M3 363 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 DACT1Q9NYF0 836 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 CLIC4Q9Y696 253 aa15.52■□□□□ 0.08
PCDHGC3-208ENST00000622836 DGKIO75912 1065 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 ERLIN2O94905 339 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 PDIA4P13667 645 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 PAN2Q504Q3 1202 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 TWF2Q6IBS0 349 aaKnown RBP15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 SPRED2Q7Z698 418 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 RNF169Q8NCN4 708 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 SP7Q8TDD2 431 aaPredicted RBP15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 ASAP3Q8TDY4 903 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 PLIN2Q99541 437 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 NT5C3AQ9H0P0 336 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 IFT122Q9HBG6 1241 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 CHST12Q9NRB3 414 aa15.51■□□□□ 0.07
PCDHGC3-208ENST00000622836 LRRIQ4A6NIV6 560 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 C9IYK1 514 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 E9PMD0 336 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 INO80B-WBP1J3KQ70 363 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 RFXAPO00287 272 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 GTPBP6O43824 516 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 SSBP05455 408 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 CYP11B2P19099 503 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 GLRA2P23416 452 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 ARL2P36404 184 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 UBA7P41226 1012 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 ERVK-21P61565 698 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 NCBP1Q09161 790 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 CAPSQ13938 189 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 DSC3Q14574 896 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 CABP7Q86V35 215 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 ABI1Q8IZP0 508 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 FBXO22Q8NEZ5 403 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 MAFAQ8NHW3 353 aaPredicted RBP15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 CALML4Q96GE6 196 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 AK8Q96MA6 479 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 C17orf80Q9BSJ5 609 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 MMTAG2Q9BU76 263 aaKnown RBP15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 TMEM161AQ9NX61 479 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 CHD7Q9P2D1 2997 aa15.5■□□□□ 0.07
PCDHGC3-208ENST00000622836 EPOPA6NHQ4 379 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 TBKBP1A7MCY6 615 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 EYA4O95677 639 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 CTNNB1P35222 781 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 LONP1P36776 959 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 PTENP60484 403 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 SPOUT1Q5T280 376 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 CMTR2Q8IYT2 770 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 GDPD5Q8WTR4 605 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 PPM1EQ8WY54 764 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 IFT74Q96LB3 600 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 SAMD11Q96NU1 681 aa15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 ELAC1Q9H777 363 aaKnown RBP15.49■□□□□ 0.07
PCDHGC3-208ENST00000622836 CDH23Q9H251 3354 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 HOXA2O43364 376 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 FGFR1P11362 822 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 SKIP12755 728 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 GATMP50440 423 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 ADGRE1Q14246 886 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 BECN1Q14457 450 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 EPC2Q52LR7 807 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 ECHDC2Q86YB7 292 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 ZBTB8OSQ8IWT0 167 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 TMEM192Q8IY95 271 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 DEPTORQ8TB45 409 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 KIFAP3Q92845 792 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 ZNF689Q96CS4 500 aaPredicted RBP15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 USP28Q96RU2 1077 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 MINDY3Q9H8M7 445 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 AGPAT5Q9NUQ2 364 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 RWDD3Q9Y3V2 267 aa15.48■□□□□ 0.07
PCDHGC3-208ENST00000622836 A0A0U1RQF3 1178 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 LIG1P18858 919 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 FAM189BP81408 668 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 POU5F1BQ06416 359 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 GRB10Q13322 594 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 PPP2R5AQ15172 486 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 STK38Q15208 465 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 PTPAQ15257 358 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 PCBP1Q15365 356 aaKnown RBP eCLIP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms