RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-210ENST00000621245 FAM167AQ96KS9 214 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 RIT2Q99578 217 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 WRAP73Q9P2S5 460 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-210ENST00000621245 TPCN1Q9ULQ1 816 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 KMT2EQ8IZD2 1858 aa12.9□□□□□ -0.34
CPNE3-210ENST00000621245 GPR182O15218 404 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 GPR37L1O60883 481 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 FGF18O76093 207 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 PLA2G5P39877 138 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 NDUFV1P49821 464 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
CPNE3-210ENST00000621245 SMAD2Q15796 467 aaKnown RBP12.89□□□□□ -0.35
CPNE3-210ENST00000621245 SPOUT1Q5T280 376 aaKnown RBP12.89□□□□□ -0.35
CPNE3-210ENST00000621245 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 MIER3Q7Z3K6 550 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 ADHFE1Q8IWW8 467 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 TRIM22Q8IYM9 498 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 C1orf112Q9NSG2 853 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 TMEM161AQ9NX61 479 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 CDH22Q9UJ99 828 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 VAV3Q9UKW4 847 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
CPNE3-210ENST00000621245 MEIS3P2A8K0S8 358 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 HAX1O00165 279 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 MAGEB2O15479 319 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 DARSP14868 501 aaKnown RBP12.88□□□□□ -0.35
CPNE3-210ENST00000621245 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
CPNE3-210ENST00000621245 JAK3P52333 1124 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
CPNE3-210ENST00000621245 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 NAALADL2Q58DX5 795 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 PLPP4Q5VZY2 271 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 ANO5Q75V66 913 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 ZNF598Q86UK7 904 aaKnown RBP12.88□□□□□ -0.35
CPNE3-210ENST00000621245 ECHDC2Q86YB7 292 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 PHF20Q9BVI0 1012 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 DDX25Q9UHL0 483 aaKnown RBP12.88□□□□□ -0.35
CPNE3-210ENST00000621245 MUTYHQ9UIF7 546 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 CD207Q9UJ71 328 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 DENND4AQ7Z401 1863 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 C2orf16Q68DN1 1984 aa12.88□□□□□ -0.35
CPNE3-210ENST00000621245 PLXNA3P51805 1871 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 A0A087WZ62 844 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 IGKV6-21A0A0C4DH24 114 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 HIDE1A8MVS5 230 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 WNT7AO00755 349 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 CPLX1O14810 134 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 FSCN2O14926 492 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 B4GALT3O60512 393 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 SFNP31947 248 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 TBC1D8BQ0IIM8 1120 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 LETM2Q2VYF4 491 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 TMEM173Q86WV6 379 aaPredicted RBP12.87□□□□□ -0.35
CPNE3-210ENST00000621245 THNSL1Q8IYQ7 743 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 SMRP1Q8NCR6 262 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 HELQQ8TDG4 1101 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 LPPQ93052 612 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 FDXACB1Q9BRP7 624 aaPredicted RBP12.87□□□□□ -0.35
CPNE3-210ENST00000621245 NIFKQ9BYG3 293 aaKnown RBP12.87□□□□□ -0.35
CPNE3-210ENST00000621245 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 TLR9Q9NR96 1032 aa12.87□□□□□ -0.35
CPNE3-210ENST00000621245 TDRD15B5MCY1 1934 aaKnown RBP12.87□□□□□ -0.35
CPNE3-210ENST00000621245 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 EPB41L2O43491 1005 aaKnown RBP12.86□□□□□ -0.35
CPNE3-210ENST00000621245 DCXO43602 365 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 EYA4O95677 639 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 FDPSP14324 419 aaKnown RBP12.86□□□□□ -0.35
CPNE3-210ENST00000621245 FOSBP53539 338 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 AK2P54819 239 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 NPEPPSP55786 919 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
CPNE3-210ENST00000621245 DUSP6Q16828 381 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 BCL7CQ8WUZ0 217 aaPredicted RBP12.86□□□□□ -0.35
CPNE3-210ENST00000621245 HAS1Q92839 578 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 ELAC1Q9H777 363 aaKnown RBP12.86□□□□□ -0.35
CPNE3-210ENST00000621245 TLE6Q9H808 572 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 NRBP2Q9NSY0 501 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 PRKAG3Q9UGI9 489 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 USP15Q9Y4E8 981 aaPredicted RBP12.86□□□□□ -0.35
CPNE3-210ENST00000621245 PCDHB12Q9Y5F1 795 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 STK36Q9NRP7 1315 aa12.86□□□□□ -0.35
CPNE3-210ENST00000621245 MYO10Q9HD67 2058 aa12.85□□□□□ -0.35
CPNE3-210ENST00000621245 NT5C1B-RDH14C9J2C7 533 aa12.85□□□□□ -0.35
CPNE3-210ENST00000621245 ZBTB39O15060 712 aa12.85□□□□□ -0.35
CPNE3-210ENST00000621245 NCK2O43639 380 aa12.85□□□□□ -0.35
CPNE3-210ENST00000621245 PFKFB2O60825 505 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms